Publications (PURE)

Publications
95 (of 95 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Whale clear keyword filter. (source: University of St Andrews PURE)
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Accounting for preferential sampling in species distribution models Maria Grazia Pennino, Iosu Paradinas, Janine Baerbel Illian, Facundo Muñoz, José María Bellido, Antonio López-Quílez, David Conesa
2019
Advances in research on the impacts of anti-submarine sonar on beaked whales Y. Bernaldo De Quirós, A. Fernandez, R. W. Baird, R. L. Brownell, Natacha Aguilar de Soto, D. Allen, M. Arbelo, M. Arregui, A. Costidis, A. Fahlman, A. Frantzis, F. Gulland, M. Iñíguez, Mark Johnson, A. Komnenou, H. Koopman, D. A. Pabst, W. D. Roe, E. Sierra, M. Tejedor, G. Schorr
2019
Automated peak detection method for behavioral event identification David A. Sweeney, Stacy L. Deruiter, Ye Joo McNamara-Oh, Tiago A. Marques, Patricia Arranz, J. Calambokidis
2019
Behavioral responses of individual blue whales (Balaenoptera musculus) to mid-frequency military sonar Brandon Southall, Stacy DeRuiter, Ari Friedlaender, Alison Stimpert, Jeremy Goldbogen, Elliot Hazen, Caroline Casey, Selene Fregosi, Dave Cade, Ann Allen, Catriona M Harris, Greg Schorr, Dave Moretti, Shane Guan, John Calambokidis
2019
Decline in abundance and apparent survival rates of fin whales (Balaenoptera physalus) in the northern Gulf of St. Lawrence Christian Ramp, Julien Delarue, Alain Carpentier, Martine Bérubé, Per J. Palsbøl, Richard Sears, Philip Steven Hammond
2019
Body density of humpback whales (Megaptera novaengliae) in feeding aggregations estimated from hydrodynamic gliding performance Tomoko Narazaki, Saana Isojunno, Douglas P. Nowacek, Ari S. Friedlaender, Christian Ramp, Sophie Caroline Smout, Kagari Aoki, Volker Bernt Deecke, Katsufumi Sato, Patrick Miller
2018
Distribution and abundance of beaked whales (Family Ziphiidae) off Cape Hatteras, North Carolina, U.S.A. McLellan W. A. , R. McClarney, E.W. Cummings, Andrew J. Read, Charles G. M. Paxton, Joel T. Bell, A.E. Pabst

Fin whale density and distribution estimation using acoustic bearings derived from sparse arrays Danielle Harris, Jennifer L. Miksis-Olds, Julia A. Vernon, Len Thomas
2018
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie
2018
Phylogenetic relationships in southern African Bryde's whales inferred from mitochondrial DNA Philip Steven Hammond, Vic G Cockcroft, Peter B Best, Meredith Thornton, Jefferson Alden Graves
2018
The challenge of habitat modelling for threatened low density species using heterogeneous data Ana Maria Canadas, Natacha Aguilar de Soto, M. Aissi, A. Arcangeli, M. Azzolin, A. B-Nagy, G Bearzi, I. Campana, C. Chicote, Cedric Cotte, R. Crosti, L David, A. Di Natale, A. Frantzis, P. Garcia, M. Gazo, R. Gutierrez-Xarxa, D. Holcer, S. Laran, G. Lauriano, T Lewis, A. Moulins, B. Mussi, G. Notarbartolo di Sciara, Simone Panigada, X. Pastor, E. Politi, M. Pulcini, J.A. Raga, Luke Edward Rendell, M. Rosso, P. Tepsich, J. Tomás, M. Tringali, Th. Roger
2018
Two unit analysis of Sri Lankan pygmy blue whale song over a decade Jennifer L. Miksis-Olds, Sharon L. Nieukirk, Danielle Harris
2018
A new approach to estimate fecundity rate from inter-birth intervals Monica Arso Civil, Barbara Cheney, Paul Thompson, Philip Steven Hammond
2017
An analysis of pilot whale vocalization activity using hidden Markov models Valentin Mina Popov, Roland Langrock, Stacy Lynn De Ruiter, Fleur Visser
2017
Can the camera lie? A non-permanent nick in a bottlenose dolphin (Tursiops truncatus) Barbara Cheney, Paul M Thompson, Philip Steven Hammond
2017
Determining the behavioural dose-response relationship of marine mammals to air gun noise and source proximity Rebecca A. Dunlop, Michael J. Noad, Robert D. McCauley, Lindesay Alexandra Sarah Scott-Hayward, Eric Kniest, Robert Slade, David Paton, Douglas H. Cato
2017
Different modes of acoustic communication in deep-diving short-finned pilot whales (Globicephala macrorhynchus) Jacobo Marrero Perez, Frants H. Jensen, Laia Rojano-Doñate, Natacha Aguilar de Soto
2017
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond
2017
Effects of a scientific echo sounder on the behavior of short-finned pilot whales (Globicephala macrorhynchus) Lindesay Alexandra Sarah Scott-Hayward, Dinara Sadykova, Doug Nowacek, Andrew Read
2017
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt
2017
Individual, ecological, and anthropogenic influences on activity budgets of long-finned pilot whales Saana Isojunno, Dinara Sadykova, Stacy Lynn De Ruiter, Charlotte Curé, Fleur Visser, Len Thomas, Patrick Miller, Catriona M Harris
2017
Late summer distribution and abundance of ice-associated whales in the Norwegian High Arctic Jade Vacquié-Garcia, Christian Lydersen, Tiago A. Marques, Jon Aars, Heidi Ahonen, Mette Skern-Mauritzen, Nils Oien, Kit M Kovacs
2017
Lloyd's mirror effect in fin whale calls and its use to infer the depth of vocalizing animals Andreia Pereira, Danielle Harris, Peter Lloyd Tyack, Luis Matias
2017
Point process models for spatio-temporal distance sampling data from a large-scale survey of blue whales Joyce Yuan , F. E. Bachl, F. Lindgren, David Louis Borchers, Janine Baerbel Illian, Stephen Terrence Buckland, H Rue, T. Gerrodette
2017
Rebuilding beluga stocks in West Greenland M. P. Heide-Jørgensen, R. G. Hansen, S. Fossette, N. H. Nielsen, David Louis Borchers, H. Stern, L. Witting
2017
Spatio-temporal variation in click production rates of beaked whales Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson
2017
Sperm whale (Physeter macrocephalus) collision with a research vessel Gregory L. Fulling, Thomas A. Jefferson, Dagmar Fertl, Juan Carlos Salinas Vega, Cornelia Sabrina Oedekoven, Stan A. Kuczaj II
2017
True’s beaked whale (Mesoplodon mirus) in Macaronesia Natacha Aguilar de Soto, Vidal Martin, Monica Silva, Roland Edler, Cristel Reyes, Manuel Carrillo, Agustina Schiavi, Talia Morales, Belen García-Ovide, Anna Sanchez-Mora, Nerea Garcia-Tavero, Lisa Steiner, Michael Scheer, Roland Gockel, Dylan Walker, Enrico Villa, Petra Szlama, Ida K. Eriksson, Marisa Tejedor, Monica Perez-Gil, João Quaresma, Wojtek Bachara, Emma Louise Carroll
2017
Underwater ambient noise in a baleen whale migratory habitat off the Azores Miriam Romagosa, Irma Cascão, Nathan D. Merchant, Marc O. Lammers, Eva Giacomello, Tiago A. Marques, Mónica A. Silva
2017
Vocal foragers and silent crowds Fleur Visser, Annebelle C.M. Kok, Machiel G. Oudejans, Lindesay Alexandra Sarah Scott-Hayward, Stacy Lynn De Ruiter, Ana Catarina De Carvalho Alves, Ricardo Nuno Antunes, Saana Isojunno, Graham J. Pierce, Hans Slabbekoorn, Jef Huisman, Patrick Miller
2017
Whale distribution in a breeding area Daniel Danilewicz, Philip Steven Hammond, Len Thomas, Alexandre N Zerbini
2017
Whales Philip Steven Hammond, Sonja Heinrich, Sascha Kate Hooker, Peter Lloyd Tyack
2017
Abundance and distribution of sperm whales in the Canary Islands Andrea Fais, Tim P. Lewis, Daniel P. Zitterbart, Omar Álvarez, Ana Tejedor, Natacha Aguilar de Soto
2016
Body density and diving gas volume of the northern bottlenose whale (Hyperoodon ampullatus) Patrick Miller, Tomoko Narazaki, Saana Isojunno, Kagari Aoki, Sophie Caroline Smout, Katsufumi sato
2016
From physiology to policy Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas
2016
Gauging allowable harm limits to cumulative, sub-lethal effects of human activities on wildlife Rob Williams, Len Thomas, Christopher W. Clark, Philip Steven Hammond
2016
Modeling the aggregated exposure and responses of bowhead whales Balaena mysticetus to multiple sources of anthropogenic underwater sound William T. Ellison, Roberto Racca, Christopher W. Clark, Bill Streever, Adam S. Frankel, Erica Fleishman, Robyn Angliss, Joel Berger, Darlene Ketten, Melania Guerra, Matthias Leu, Megan McKenna, Todd Sformo, Brandon Southall, Robert Suydam, Len Thomas
2016
Naval sonar disrupts foraging behaviour in humpback whales Lise D. Sivle, Paul Wensveen, Petter Kvadsheim, Frans-Peter A. Lam, Fleur Visser, Charlotte Cure, Catriona M Harris, Peter Lloyd Tyack, Patrick Miller
2016
Novel application of a quantitative spatial comparison tool to species distribution data Esther Lane Jones, Luke Edward Rendell, Enrico Pirotta, Jed Long
2016
Sperm whale predator-prey interactions involve chasing and buzzing, but no acoustic stunning A. Fais, Mark Johnson, M. Wilson, Natacha Aguilar de Soto, P. T. Madsen
2016
The challenges of analyzing behavioral response study data Catriona M Harris, Len Thomas, Dinara Sadykova, Stacy Lynn De Ruiter, Peter Lloyd Tyack, Brandon L. Southall, Andrew J. Read, Patrick Miller
2016
Tracking the kinematics of caudal-oscillatory swimming Lucía Martina Martín López, Natacha Aguilar de Soto, Patrick Miller, Mark Johnson
2016
Unleashing the Kraken Charles G. M. Paxton
2016
Adapting to a warmer ocean – seasonal shift of baleen whale movements over three decades Christian Ramp, Julian Delarue, Per J Palsbøll, Richard Sears, Philip Steven Hammond
2015
Distribution, abundance, and feeding ecology of baleen whales in Icelandic waters: have recent environmental changes had an effect? Gisli A Vikingsson, Daniel G Pike, Héðinn Valdimarsson, Anna Schleimer, Thorvaldur Gunnlaugsson, Teresa Silva, Bjarki Þ Elvarsson, Bjarni Mikkelsen, Nils Øien, Geneviève Desportes, Valur Bogason, Philip Steven Hammond
2015
Dose response severity functions for acoustic disturbance in cetaceans using recurrent event survival analysis Catriona M Harris, Dinara Sadykova, Stacy Lynn De Ruiter, Peter Lloyd Tyack, Patrick Miller, Petter Kvadsheim, Frans-Peter Lam, Len Thomas
2015
Expert elicitation of seasonal abundance of North Atlantic right whales Eubalaena glacialis in the mid-Atlantic Cornelia Sabrina Oedekoven, Erica Fleishman, Philip Hamilton, James S. Clark, Robert Schilling Schick
2015
From sea ice to blubber J.E. Braithwaite, J.J. Meeuwig, K.C.S. Jenner, Andrew Stuart Brierley
2015
Inter-annual and seasonal trends in cetacean distribution, density and abundance off southern California G.S. Campbell, Len Thomas, K. Whitaker, A.B. Douglas, J. Calambokidis, J.A. Hildebrand
2015
Mitigation of vessel-strike mortality of endangered Bryde's whales in the Hauraki Gulf, New Zealand Rochelle Constantine, Mark Johnson, Leena Riekkola, Stephanie Jervis, Lily Kozmian-Ledward, Todd Dennis, Leigh G. Torres, Natacha Aguilar de Soto
2015
No case for Japan to kill minke whales Andrew Stuart Brierley
2015
Passive acoustic monitoring of beaked whale densities in the Gulf of Mexico John Hildebrand, Simone Baumann-Pickering, Kaitlin Frasier, Jennifer Trickey, Karlina Merkens, Sean Wiggins, Mark McDonald, Lance Garrison, Danielle Harris, Tiago A. Marques, Len Thomas
2015
Predator sound playbacks reveal strong avoidance responses in a fight strategist baleen whale Charlotte Cure, Lise Doksaeter-Sivle, Fleur Visser, Paul Wensveen, Saana Isojunno, Catriona M Harris, Petter Kvadsheim, Frans-Peter Lam, Patrick Miller
2015
Procedure description Tiago A. Marques, Jessica Shaeffer, Len Thomas
2015
Severity of expert-identified behavioural responses of humpback whale, minke whale, and northern bottlenose whale to naval sonar Lise D. Sivle, Petter H. Kvadsheim, Charlotte Cure, Saana Isojunno, Paul Wensveen, Frans-Peter A. Lam, Fleur Visser, Lars Kleivane, Peter Lloyd Tyack, Catriona M Harris, Patrick Miller
2015
Single-click beam patterns suggest dynamic changes to the field of view of echolocating Atlantic Spotted Dolphins (Stenella frontalis) in the wild Frants Jensen, Magnus Wahlberg, Kristian Beedholm, Mark Johnson, Natacha Aguilar de Soto, Peter Madsen
2015
Sperm whale echolocation behaviour reveals a directed, prior-based search strategy informed by prey distribution A. Fais, Natacha Aguilar de Soto, Mark Johnson, C. Pérez-González, Patrick Miller, P.T. Madsen
2015
The modelling and assessment of whale-watching impacts Leslie Frances New, Ailsa Jane Hall, R. Harcourt, G. Kaufman, E.C.M. Parsons, H.C. Pearson, A.M. Cosentino, Robert Schilling Schick
2015
Tracking marine mammals in 3D using electronic tag data C. Laplanche, Tiago A. Marques, Len Thomas
2015
Trends in bowhead whales in West Greenland S.L. Rekdal, R.G. Hansen, David Louis Borchers, L. Bachmann, K.L. Laidre, O. Wiig, N.H. Nielsen, S. Fossette, O. Tervo, M.P. Heide-Jørgensen
2015
Whaling review Andrew Stuart Brierley
2015
Activities, motivations and disturbance Enrico Pirotta, Leslie Frances New, John Harwood, David Lusseau
2014
Assessing performance of Bayesian state-space models fit to Argos Satellite telemetry locations processed with Kalman Filtering Monica A. Silva, Ian Jonsen, Debbie JF Russell, Rui Prieto, David Thompson, Mark F. Baumgartner
2014
Counting whales in a challenging, changing environment N. Kelly, O. Boebel, A. S. Friedlaender, H. Herr, K. -H. Kock, L. S. Lehnert, T. Maksym, J. Roberts, M. Scheidat, U. Siebert, Andrew Stuart Brierley
2014
Dose-response relationships for the onset of avoidance of sonar by free-ranging killer whales Patrick Miller, Ricardo Nuno Antunes, Paul Wensveen, Filipa Isabel Pereira Samarra, Ana Catarina De Carvalho Alves, Peter Lloyd Tyack, Petter H. Kvadsheim, Lars Kleivane, Frans-Peter A. Lam, Michael A. Ainslie, Len Thomas
2014
Fin whale survival and abundance in the Gulf of St. Lawrence, Canada Christian Ramp, J Delarue, Martine Bérubé, Philip Steven Hammond, Richard Sears
2014
Long-term trends in the use of a protected area by small cetaceans in relation to changes in population status Barbara Cheney, Ross Corkery, John Durban, Kate Grellier, Philip Steven Hammond, Valentina Islas Villanueva, Vincent Janik, Susan Lusseau, Kim Parsons, Ben Wilson, Paul Thompson
2014
The social context of individual foraging behaviour in long-finned pilot whales (Globicephala melas) Fleur Visser, Patrick Miller, Ricardo Nuno Antunes, Machiel G. Oudejans, Monique Lea MacKenzie, Kagari Aoki, Frans-Peter A. Lam, Petter H. Kvadsheim, Jef Huisman, Peter Lloyd Tyack
2014
Towards collective circum-antarctic passive acoustic monitoring I. Van Opzeeland, F. Samaran, K.M. Stafford, K. Findlay, J. Gedamke, Danielle Harris, B.S. Miller
2014
Blue whales respond to simulated mid-frequency military sonar Jeremy A. Goldbogen, Brandon L. Southall, Stacy Lynn De Ruiter, John Calambokidis, Ari S. Friedlaender, Elliott L. Hazen, Erin A. Falcone, Gregory S. Schorr, Annie Douglas, David J. Moretti, Chris Kyburg, Megan F. McKenna, Peter Lloyd Tyack
2013
Cetacean abundance and distribution in European Atlantic shelf waters to inform conservation and management Philip Steven Hammond, Kelly Macleod, Per Berggren, David Louis Borchers, M Louise Burt, Ana Cañadas, Genevieve Desportes, Greg P Donovan, Anita Gilles, Douglas Michael Gillespie, Jonathan Charles David Gordon, Lex Hiby, Iwona Kuklik, Russell Leaper, Kristina Lehnert, Mardik Leopold, Philip Lovell, Nils Øien, Charles G. M. Paxton, Vincent Ridoux, Emer Rogan, Filipa Isabel Pereira Samarra, Meike Scheidat, Marina Sequeira, Ursula Siebert, Henrik Skov, Mark Tasker, Jonas Teilmann, Olivier Van Canneyt, José Antonio Vázquez
2013
Evidence for density-dependent changes in body condition and pregnancy rate of North Atlantic fin whales over four decades of varying environmental conditions Gisli A. Vikingsson, Astthor Gislason, Christina Lockyer, Leslie New, Len Thomas, Philip Steven Hammond
2013
First direct measurements of behavioural responses by Cuvier's beaked whales to mid-frequency active sonar Stacy Lynn De Ruiter, Brandon L. Southall, John Calambokidis, Walter M. X. Zimmer, Dinara Sadykova, Erin A. Falcone, Ari S. Friedlaender, John E. Joseph, Gregory S. Schorr, Len Thomas, Peter Lloyd Tyack
2013
Using hidden Markov models to deal with availability bias on line transect surveys David Louis Borchers, Walter Zucchini, M.P. Heide-Jørgensen, Ana Cañadas, Roland Langrock
2013
Using hierarchical bayes to understand movement, health, and survival in the endangered North Atlantic right whale Robert Schilling Schick, Scott D. Kraus, Rosalind M. Rolland, Amy R. Knowlton, Philip K. Hamilton, Heather M. Pettis, Robert D. Kenney, James S. Clark
2013
Global coverage of cetacean line-transect surveys Kristin Kaschner, Catriona M Harris
2012
Classification of animal dive tracks via automatic landmarking, principal components analysis and clustering Cameron Walker, Monique Lea MacKenzie, Carl Robert Donovan, Gordon Drummond Hastie,
2011
Competing conservation objectives for predators and prey Martin Krkošek, Trevor A Branch, Stephen Clark, Philip Steven Hammond, Eric Hoyt, Dawn P Noren, David Rosen, Arliss Winship
2011
Density estimation implications of increasing ambient noise on beaked whale click detection and classification Tiago A. Marques, Jessica Ward, Susan Jarvis, David Moretti, Ronald Morrissey, Nancy DiMarzio, Len Thomas
2010
Double-observer line transect methods Stephen Terrence Buckland, Jeffrey L. Laake, David Louis Borchers
2010
The effect of sea-ice loss on beluga whales (Delphinapterus leucas) in West Greenland M. P. Heide-Jørgensen, K. L. Laidre, David Louis Borchers, Tiago A. Marques, H. Stern, M. Simon
2010