Publications (PURE)

Publications

Recent publications


132  (of 132 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Spatial clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2019 (1/1)
Ecology and Evolution
vol.9 pp.653-663
(Article)

Spatial Statistics
vol.In press 
(Article)
Non-stationary Gaussian models with physical barriers
Haakon Bakka, Jarno Vanhatalo, Janine Baerbel Illian, Daniel Simpson, Haavard Rue 
Keywords: Archipelago, Barriers, Coastline problem, INLA, Spatial statistics, Stochastic partial differential equations

Environmental Pollution
vol.247 pp.332-339
(Article)
Spatial variability in total and organic mercury levels in Antarctic krill Euphausia superba across the Scotia Sea
José Seco, José C. Xavier, João P. Coelho, Bárbara Pereira, Geraint Tarling, Miguel A. Pardal, Paco Bustamante, Gabriele Stowasser, Andrew Stuart Brierley, Maria E. Pereira 
Keywords: Food-web, Eggs, Organic mercury, Southern Ocean, Antarctica

Ecography

(Article)
Understanding species distribution in dynamic populations
Andrea Soriano-Redondo, Stuart Bearhop, Geoff M. Hilton, Leigh Lock, Andrew Stanbury, Stephen C. Votier, Janine Baerbel Illian 
Keywords: Species distribution models, Point process models, Spatio-temporal log-Gaussian Cox process, Latent field, Dispersal, Colonisation, Reintroduction

Ecography
vol.Early View 
(Article)

Journal of the Royal Statistical Society: Series A (Statistics in Society)
vol.Early View 
(Article)
2018 (4)
Journal of the Royal Statistical Society: Series C (Applied Statistics)
vol.67 pp.705-722
(Article)
2018 (5)
Marine Policy
vol.91 pp.113-121
(Article)
AIS data to inform small scale fisheries management and marine spatial planning
Mark Andrew James, Tania Cecilia Mendo Aguilar, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson 
Keywords: Monitoring, Inshore fisheries, Trips, PostgreSQL, Trajectories
2018 (10)
Biological Conservation
vol.226 pp.42-53
(Article)
Basin-scale distribution of harbour porpoises in the Baltic Sea provides basis for effective conservation actions
Ida Carlén, Len Thomas, Julia Carlström, Mats Amundin, Jonas Teilmann, Nick Tregenza, Jakob Tougaard, Jens C. Koblitz, Signe Sveegaard, Daniel Wennerberg, Olli Loisa, Michael Dähne, Katharina Brundiers, Monika Kosecka, Line Anker Kyhn, Cinthia Tiberi Ljungqvist, Iwona Pawliczka, Radomil Koza, Bartlomiej Arciszewski, Anders Galatius, Martin Jabbusch, Jussi Laaksonlaita, Jussi Niemi, Sami Lyytinen, Anja Gallus, Harald Benke, Penina Blankett, Krzysztof E. Skóra, Alejandro Acevedo-Gutiérrez 
Keywords: Spatial distribution, Passive acoustic monitoring, Population structure, Harbour porpoise, Marine protected areas, Biodiversity conservation
2018 (24/7)
Global Ecology and Biogeography
vol.27 pp.760-786
(Article)
BioTIME
Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, DuÅ¡an Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš VrÅ¡ka, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler 
Keywords: Biodiversity, Global, Spatial, Species richness, Temporal, Turnover

Journal of the Royal Statistical Society: Series C (Applied Statistics)
vol.Early View 
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.216-230
(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania

Journal of the Marine Biological Association of the United Kingdom
vol.First View 
(Article)

Journal of the Acoustical Society of America
vol.143 pp.2980-2993
(Article)
2018 (28/6)
Marine Ecology Progress Series
vol.598 pp.35-48
(Article)
2018 (1/4)
Current Zoology
vol.64 pp.213-221
(Article)
2018 (3)
Journal of Applied Ecology
vol.55 pp.684-693
(Article)
Harbour seals avoid tidal turbine noise
Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson 
Keywords: Collision risk, Marine mammals, Avoidance, Renewable energy, Pinnipeds, Marine spatial planning, Underwater noise, Tidal turbines, Behavioural responsesNERC

Statistics in Medicine
vol.Early View 
(Article)
Identifying prognostic structural features in tissue sections of colon cancer patients using point pattern analysis
Peter David Caie, Janine Baerbel Illian, Ben C. Stevenson, Anne Savage, David James Harrison, James L. Brown 
Keywords: Colorectal cancer, Palm intensity function, Spatial point patterns
2018 (12)
Spatial Statistics
vol.28 pp.169-193
(Article)
Level set Cox processes
Anders Hildeman, David Bolin, Jonas Wallin, Janine Baerbel Illian 
Keywords: Point process, Cox process, Level set inversion, Classification, Gaussian fields
2018 (1)

(Commissioned report)
Man-made structures and Apex Predators: Spatial interactions and overlap (MAPS)
James Grecian, Elizabeth A Masden, Philip Steven Hammond, Ellie Owen, Francis Daunt, Sarah Wanless, Debbie JF Russell 
Keywords: NERC
2018 (25/7)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (4)
Acta Oecologica
vol.88 pp.41-51
(Article)
Seal carrion is a predictable resource for coastal ecosystems
Maria-Martina Quaggiotto, Philip S. Barton, Chris Morris, Simon E. W. Moss, Patrick Pomeroy, Dominic J. McCafferty,  
Keywords: Predictability, Resource subsidy, Coastal, Carcass, Pinniped, Relative standard error, ScavengerNERC

Wiley Interdisciplinary Reviews: Computational Statistics
vol.Early View 
(Review article)
Spatial modeling with R-INLA
Haakon Bakka, HÃ¥vard Rue, Geir-arne Fuglstad, Andrea Riebler, David Bolin, Janine Baerbel Illian, Elias Krainski, Daniel Simpson, Finn Lindgren 
Keywords: Approximate Bayesian inference, Gaussian Markov random fields, Laplace approximations, Sparse matrices, Stochastic partial differential equations
2017 (14/8)
Conservation Letters
vol.10 pp.459-468
(Article)
Addressing uncertainty in marine resource management; combining community engagement and tracking technology to characterize human behavior
Kristian Metcalfe, Tim Collins, Kirsten E. Abernethy, Richard Boumba, Jean-Claude Dengui, Ricky Miyalou, Richard J. Parnell, Kate E. Plummer, Debbie JF Russell, Gilbert Koumba Safou, Dominic Tilley, Rachel A. Turner, Hilde Vanleeuwe, Matthew J. Witt, Brendan J. Godley 
Keywords: Africa, Artisanal fisheries, Behaviour, Fisheries management, Marine spatial planning, Participatory data collection, Resource use, Small-scale fisheries
2017 (9)
Flora
vol.234 pp.1-6
(Article)
2017 (12)
Methods in Ecology and Evolution
vol.8 pp.1690-1702
(Article)
2017 (9/1)
Current Biology
vol.27 pp.113-119
(Article)
2017 (6)
Journal of Applied Ecology
vol.54 pp.894-902
(Article)
Counting chirps
G. John Measey, Ben Stevenson, tanya scott, Res Altwegg, David Louis Borchers 
Keywords: Acoustic spatially explicit capture-recapture, Signal strength, Time of arrival, Triangulation, Anurans
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.8-19
(Article)
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic
Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond 
Keywords: Design-based abundance, Model-based abundance, Beaked whales, Sperm whales, Pilot whales, Distribution, Deep divers, Habitat models
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.41-58
(Article)
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys
Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt 
2017
vol.194 pp.231-239
(Conference contribution)
2017 (12/10)
Conservation Letters
vol.10 pp.588-595
(Letter)
Extinction is imminent for Mexico’s endemic porpoise unless fishery bycatch is eliminated
Barbara L Taylor, Lorenzo Rojas-Bracho, Jeffrey Moore, Armando Jaramillo-Legorreta, Jay M Ver Hoef, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Jay Barlow, Tim Gerrodette, Nicholas Tregenza, Len Thomas, Philip Steven Hammond 
Keywords: Extinction, Illegal fishing, Line transect, Phocoena sinus, Totoaba macdonaldi, Vaquita abundance , Passive acoustic monitoring , C-POD
2017 (14/9)
Scientific Reports
vol.7 
(Article)
Fine-scale harbour seal usage for informed marine spatial planning
Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout 
2017 (10)
Advances in Statistical Analysis
vol.101 pp.475-494
(Article)
2017 (10)
Advances in Statistical Analysis
vol.101 pp.495-520
(Article)
2017 (7/2)
Endangered Species Research
vol.32 pp.59-70
(Article)
Late summer distribution and abundance of ice-associated whales in the Norwegian High Arctic
Jade Vacquié-Garcia, Christian Lydersen, Tiago A. Marques, Jon Aars, Heidi Ahonen, Mette Skern-Mauritzen, Nils Oien, Kit M Kovacs 
Keywords: Abundance, Arctic, Belugas, Bowhead whales, Climate change, Distribution, Narwhals, Svalbard, White whales
2017 (14/7)
Pilot and Feasibility Studies
vol.4 
(Article)
MapMySmoke
Robert Schilling Schick, Tom Kelsey, John Marston, Kay Sampson, Gerald Michael Humphris 
Keywords: Smoking cessation, Smartphone, App, Hidden Markov models, Geospatial, INLA
2017 (16/1)
Agriculture, Ecosystems & Environment
vol.237 pp.280-289
(Article)

Biometrics

(Article)
Open population maximum likelihood spatial capture-recapture
Richard Glennie, David Louis Borchers, Matthew Murchie, Bart Harmsen, Rebecca Foster 
Keywords: Abundance, Survival, Spatial capture-recapture, Open population models
2017 (12)
Annals of Applied Statistics
vol.11 pp.2270-2297
(Article)
Point process models for spatio-temporal distance sampling data from a large-scale survey of blue whales
Joyce Yuan , F. E. Bachl, F. Lindgren, David Louis Borchers, Janine Baerbel Illian, Stephen Terrence Buckland, H Rue, T. Gerrodette 
2017 (2)
Global Ecology and Biogeography
vol.26 pp.203-215
(Article)
2017 (2/2)
vol.602 
(Commissioned report)
Review of analytical approaches for identifying usage and foraging areas at sea for harbour seals
Esther Lane Jones, Sophie Caroline Smout, Debbie JF Russell, Eunice Pinn, Bernie J McConnell 
Keywords: JNCC
2017 (12)
Journal of Applied Ecology
vol.54 pp.1930-1940
(Article)
Seals and shipping
Esther Lane Jones, Gordon Drummond Hastie, Sophie Caroline Smout, Joseph Onoufriou, Nathan Merchant, Kate Brookes, David Thompson 
Keywords: Halichoerus grypus, Phoca vitulina, Spatial overlap, AIS, Telemetry, Acoustic propagation, Marine stressor, MSFD, Noise pollution, UncertaintyNERC
2017 (15/1)
Marine Pollution Bulletin
vol.114 pp.372-383
(Article)
Shipping noise in a dynamic sea
F. Chen, G. I. Shapiro, K. A. Bennett, S. N. Ingram, David Thompson, C. Vincent, Debbie JF Russell, C. B. Embling 
Keywords: Anthropogenic noise, Marine animals, Sound propagation, Acoustic modelling, Ocean frontsNERC

Scientific Reports
vol.7 
(Article)
Spatial distribution of citizen science casuistic observations for different taxonomic groups
Patrícia Tiago, Ana Ceia-Hasse, Tiago A. Marques, César Capinha, Henrique M. Pereira 
2017 (3)
Journal of the Acoustical Society of America
vol.141 pp.1962-1974
(Article)
Spatio-temporal variation in click production rates of beaked whales
Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson 
Keywords: Arts and Humanities (miscellaneous), Acoustics and Ultrasonics
2017 (31/1)
Endangered Species Research
vol.33 pp.193-209
(Article)
Survival, density, and abundance of common bottlenose dolphins in Barataria Bay (USA) following the Deepwater Horizon oil spill
Trent L. McDonald, Fawn E. Hornsby, Todd R. Speakman, Eric S. Zolman, Keith D. Mullin, Carrie Sinclair, Patricia E. Rosel, Len Thomas, Lori H. Schwacke 
Keywords: Capture-recapture, Photo-identification, Robust design, Spatial-capture model, Tursiops truncatusEcology, Nature and Landscape Conservation
2017 (2)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.136 pp.108-121
(Article)
2017 (7/3)
BMC Biology
vol.15 
(Comment/debate)
2017
vol.OESEA-15-65 
(Commissioned report)
2017 (27/12)
Marine Ecology Progress Series
vol.585 pp.213-227
(Article)
Whale distribution in a breeding area
Daniel Danilewicz, Philip Steven Hammond, Len Thomas, Alexandre N Zerbini 
Keywords: Shelter, Conservation, Density surface model, Cetacean, Line transect, Reproduction
2016 (10)
European Journal of Wildlife Research
vol.62 pp.577–587
(Article)
2016 (19/5)
PLoS One
vol.11 pp.1-16
(Article)
An efficient acoustic density estimation method with human detectors applied to gibbons in Cambodia
Benjamin M. Rawson, David Louis Borchers, Ben Stevenson, Tiago A. Marques, Len Thomas 
2016 (12)
Journal of Applied Ecology
vol.53 pp.1642-1652
(Article)
Avoidance of wind farms by harbour seals is limited to pile driving activities
Debbie JF Russell, Gordon Drummond Hastie, David Thompson, Vincent Janik, Philip Steven Hammond, Lindesay Alexandra Sarah Scott-Hayward, Jason Matthiopoulos, Esther Lane Jones, Bernie J McConnell 
Keywords: Complex Region Spatial Smoother, Disturbance, Marine renewables, Marine spatial planning, Pinnipeds, Renewable energy, Spatially Adaptive Local Smoothing Algorithm, Spatially adaptive smoothing , Underwater noiseNERC, BEIS/DECC, Scottish Government
2016 (3)
Annals of Applied Statistics
vol.10 pp.264-285
(Article)
2016 (12)
Behavioral Ecology and Sociobiology
vol.70 pp.2161–2174
(Article)
Dynamic habitat corridors for marine predators
Gordon Drummond Hastie, Debbie JF Russell, Steven Benjamins, Simon Moss, Ben Wilson, David Thompson 
Keywords: Foraging, Marine mammal, Oceanographic, Predator, Pinniped, DivingNERC
2016 (13/7)
Methods in Ecology and Evolution
vol.7 pp.762-769
(Article)
Echolocation detections and digital video surveys provide reliable estimates of the relative density of harbour porpoises
Laura D. Williamson, Kate L. Brookes, Beth E. Scott, Isla M. Graham, Gareth Bradbury, Philip Steven Hammond, Paul M. Thompson 
Keywords: Abundance, Acoustics, Availability, C-POD, Density surface modelling, Digital survey, Distance sampling, Harbour porpoise
2016 (21/3)
Marine Ecology Progress Series
vol.546 pp.271-276
(Article)
Enhanced pelagic biomass around coral atolls
Tom B. Letessier, Martin J. Cox, Jessica J. Meeuwig, Philipp H. Boersch-Supan, Andrew Stuart Brierley 
Keywords: Oceanic, Acoustic scatterers, Seamount, Tuna, Reserve, Coral reefsAquatic Science, Ecology, Ecology, Evolution, Behavior and Systematics
2016 (12)
Proceedings of Meetings on Acoustics
vol.27 
(Review article)
From physiology to policy
Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas 
2016 (3)
Biometrika
vol.103 pp.49-70
(Article)
2016 (6)

(Commissioned report)
Harbour Seal Decline - vital rates and drivers
Monica Arso Civil, Sophie Caroline Smout, Callan David Duck, Chris Morris, Joseph Onoufriou, David Thompson, Andrew Brownlow, Nicholas Davison, Caroline Cummings, Patrick Pomeroy, Bernie J McConnell, Ailsa Jane Hall 
Keywords: Harbour seal, Population Dynamics, Population decline, Bayesian approach, Photo-identification, TelemetryScottish Government, NERC
2016 (11)
Journal of Ecology
vol.104 pp.1819-1828
(Article)
2016 (11)
Ecological Indicators
vol.70 pp.67-76
(Article)
2016 (6)
Fisheries Research
vol.178 pp.101-113
(Article)
Purse-seine vessels as platforms for monitoring the population status of dolphin species in the eastern tropical Pacific Ocean
Cleridy E. Lennert-Cody, Mark N. Maunder, Paul C. Fiedler, Mihoko Minami, Tim Gerrodette, Jeremy Rusin, Carolina V. Minte-Vera, Michael Scott, Stephen Terrence Buckland 
Keywords: Dolphin abundance, Line-transect, CPUE, Bycatch, Generalized additive model
2016 (26/10)
PLoS One
vol.11 
(Article)
Spatial models of abundance and habitat preferences of Commerson’s and Peale’s dolphin in southern Patagonian waters
Natalia A. Dellabianca, Graham J. Pierce, Andrea Raya Rey, Gabriela Scioscia, David Lawrence Miller, Mónica A. Torres, M. Natalia Paso Viola, R. Natalie P. Goodall, Adrián C. M. Schiavini 
Keywords: Medicine(all), Biochemistry, Genetics and Molecular Biology(all), Agricultural and Biological Sciences(all)
2015
Spatial Statistics

(Article)
2015 (1)
Methods in Ecology and Evolution
vol.6 pp.38-48
(Article)
2015
Journal of the American Statistical Association
vol.110 pp.195-204
(Article)
2015 (7/5)
Marine Ecology Progress Series
vol.527 pp.247-259
(Article)
2015 (2)
Trends in Ecology and Evolution
vol.30 pp.104-113
(Review article)
2015 (9)
Journal of Wildlife Management
vol.79 pp.1091-1100
(Article)
2015 (11)
Oikos
vol.124 pp.1462-1472
(Article)
Intrinsic and extrinsic drivers of activity budgets in sympatric grey and harbour seals
Debbie JF Russell, Brett Thomas McClintock, Jason Matthiopoulos, Paul Thompson, David Thompson, Philip Steven Hammond, Esther Lane Jones, Monique MacKenzie, Simon Moss, Bernie J McConnell 
Keywords: Area-restricted search, Bayesian , Energetic requirements, Energy budget, Hidden process models, Pinnipeds, Time budgetBEIS/DECC, NERC
2015 (12)
Methods in Ecology and Evolution
vol.6 pp.1384-1394
(Article)
2015 (9)
Journal of Agricultural, Biological and Environmental Statistics
vol.20 pp.305-322
(Article)
2015 (27/8)
Marine Ecology Progress Series
vol.534 pp.235-249
(Article)
Patterns of space use in sympatric marine colonial predators reveals scales of spatial partitioning
Esther Lane Jones, Bernie J McConnell, Sophie Caroline Smout, Philip Steven Hammond, Callan David Duck, Christopher Morris, David Thompson, Debbie JF Russell, cecile vincent, michelle cronin, Ruth Jemma Sharples, jason matthiopoulos 
Keywords: Halichoerus grypus, Phoca vitulina, Density estimation, Propagating uncertainty, Species distribution, Telemetry, Area-based conservation
2015 (24/9)
Nature Communications
vol.6 
(Article)
Rapid biotic homogenization of marine fish assemblages
Anne Magurran, Maria Dornelas, Faye Helen Moyes, Nicholas J Gotelli, Brian McGill 
2015 (5)
Journal of Experimental Biology
vol.218 pp.1314-1324
(Article)
2015 (10)
Behavioral Ecology and Sociobiology
vol.69 
(Article)
2014 (24/6)
Ecological Modelling
vol.282 pp.44-58
(Article)
2014 (12)
Journal of Applied Ecology
vol.51 pp.1650-1660
(Article)
2014 (28/4)
Journal of Computational and Graphical Statistics
vol.23 pp.340-360
(Article)
Complex Region Spatial Smoother (CReSS)
Lindesay Alexandra Sarah Scott-Hayward, Monique Lea MacKenzie, Carl Robert Donovan, Cameron Walker,  
Keywords: Geodesic Distance, Local Radial Basis, Thin Plate Splines, Model Averaging
2014
Environmental and Ecological Statistics
vol.21 pp.715-731
(Article)
2014
Condor
vol.116 pp.149-161
(Article)
2014 (1)
Journal of Experimental Marine Biology and Ecology
vol.450 pp.30–39
(Article)
2014 (3)
Ecography
vol.37 pp.212-220
(Article)
Prioritizing global marine mammal habitats using density maps in place of range maps
Joanna Grand, Sascha Kate Hooker, Stephen Terrence Buckland, Randall R. Reeves, Lorenzo Rojas-Bracho, Doug Sandilands, Kristin Kaschner 
Keywords: Marine systems, Range maps, Density maps, Marine mammal habitats, Species richness, Conservation
2014 (3)

(Commissioned report)
Seal at-sea distribution, movements and behaviour
Debbie JF Russell, Bernie J McConnell 
2014 (7)
Marine Mammal Science
vol.30 pp.923–938
(Article)
2014
Polarforschung
vol.83 pp.47-61
(Article)
Towards collective circum-antarctic passive acoustic monitoring
I. Van Opzeeland, F. Samaran, K.M. Stafford, K. Findlay, J. Gedamke, Danielle Harris, B.S. Miller 
2013 (8)
Biological Conservation
vol.164 pp.107-122
(Article)
Cetacean abundance and distribution in European Atlantic shelf waters to inform conservation and management
Philip Steven Hammond, Kelly Macleod, Per Berggren, David Louis Borchers, M Louise Burt, Ana Cañadas, Genevieve Desportes, Greg P Donovan, Anita Gilles, Douglas Michael Gillespie, Jonathan Charles David Gordon, Lex Hiby, Iwona Kuklik, Russell Leaper, Kristina Lehnert, Mardik Leopold, Philip Lovell, Nils Øien, Charles G. M. Paxton, Vincent Ridoux, Emer Rogan, Filipa Isabel Pereira Samarra, Meike Scheidat, Marina Sequeira, Ursula Siebert, Henrik Skov, Mark Tasker, Jonas Teilmann, Olivier Van Canneyt, José Antonio Vázquez 
Keywords: Conservation status, North Sea, Line transect sampling, SCANS, Harbour porpoise, Bottlenose dolphin, Common dolphin, White-beaked dolphin, Minke whale, Bycatch, Habitats Directive
2013 (5)
Biological Reviews of the Cambridge Philosophical Society
vol.88 pp.287–309
(Article)
Estimating animal population density using passive acoustics
Tiago A. Marques, Len Thomas, Stephen Martin, David Mellinger, Jessica Ward, David Moretti, Danielle Harris, Peter Lloyd Tyack 
2013
Journal of Animal Ecology
vol.82 pp.1300-1315
(Article)
Estimating resource acquisition and at-sea body condition of a marine predator
Robert Schilling Schick, Leslie New, Len Thomas, Daniel Costa, Mark Hindell, Clive McMahon, Patrick Robinson, Samantha Simmons, Michele Thums, John Harwood, James Clark 
Keywords: Resource acquisition, Bayesian, Elephant seals, Markov chain Monte Carlo, Satellite telemetry, State-space model, Body condition, Año Nuevo, Macquarie Island
2013 (4)
Methods in Ecology and Evolution
vol.4 pp.305-315
(Article)
Fitting complex ecological point process models with integrated nested Laplace approximation
Janine Baerbel Illian, Sara Martino, Sigrunn H. Sørbye, Juan B. Gallego-Fernández, Maria Zunzunegui, M. Paz Esquivias, Justin M. Travis 
Keywords: Marked point patterns, Spatial modelling, Log-Gaussian Cox processes
2013 (25/3)
Marine Ecology Progress Series
vol.478 pp.273–285
(Article)
2013 (1)
Proceedings of the Royal Society B: Biological Sciences
vol.280 
(Article)
2013 (20/11)
Movement Ecology
vol.1 
(Article)
2013 (11)
Methods in Ecology and Evolution
vol.4 pp.1001-1010
(Article)
2012 (12)
Journal of Agricultural, Biological and Environmental Statistics
vol.17 pp.601-622
(Article)
2012 (12)
Environmental and Ecological Statistics
vol.19 pp.545-572
(Article)
2012 (12)
Annals of Applied Statistics
vol.6 pp.1499-1530
(Article)
2012 (7/5)
Marine Ecology Progress Series
vol.453 pp.227-240
(Article)
2012 (12/9)
PLoS One
vol.7 
(Article)
2012 (23/2)
Marine Ecology Progress Series
vol.448 pp.155-170
(Article)
2012 (22/9)
Proceedings of the Royal Society B: Biological Sciences
vol.279 pp.3722-3726
(Article)
2012 (21/5)
PLoS One
vol.7 
(Article)
2012 (7)
Journal of Environmental Statistics
vol.3 
(Article)
2012 (16/11)
PLoS One
vol.7 
(Article)
2011

(Other report)
Complex Region Spatial Smoother (CReSS)
Lindesay Alexandra Sarah Scott-Hayward, Monique Lea MacKenzie, Carl Robert Donovan, Cameron Walker,  
Keywords: Geodesic distance, Local radial basis, Thin plate splines, Model averaging
2009
NAMMCO Scientific Publications
vol.7 
(Article)