Publications (PURE)

Publications
70 (of 70 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Oceanography clear keyword filter. (source: University of St Andrews PURE)
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Behavioral responses of individual blue whales (Balaenoptera musculus) to mid-frequency military sonar Brandon Southall, Stacy DeRuiter, Ari Friedlaender, Alison Stimpert, Jeremy Goldbogen, Elliot Hazen, Caroline Casey, Selene Fregosi, Dave Cade, Ann Allen, Catriona M Harris, Greg Schorr, Dave Moretti, Shane Guan, John Calambokidis
2019
Changes in stable isotope compositions during fasting in phocid seals sarah habran, France Damseaux, Patrick Pomeroy, Cathy Debier, Dan Crocker, Gilles Lepoint, Krishna Das
2019
Effects of impulsive noise on marine mammals Gordon Drummond Hastie, Nathan Merchant, Thomas Goetz, Debbie JF Russell, Paul Thompson, Vincent Janik

Internal lee waves and baroclinic bores over a tropical seamount shark ‘hot-spot’ Phil Hosegood, W.A.M. Nimmo-Smith, Roland Hudson Proud, Kate Adams, Andrew Stuart Brierley
2019
Variations in age- and sex-specific survival rates help explain population trend in a discrete marine mammal population Monica Arso Civil, Barbara Cheney, Valentina Islas-Villanueva, Jefferson Alden Graves, Vincent Janik, Paul M Thompson, Philip Steven Hammond
2019
BioTIME Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, Dušan Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Miguel Maria Borges Da Costa Guint Barbosa, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš Vrška, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler
2018
Estimating effective detection area of static passive acoustic data loggers from playback experiments with cetacean vocalisations Hanna K. Nuuttila, Katharina Brundiers, Michael Dähne, Jens C. Koblitz, Len Thomas, Winnie Courtene-Jones, Peter G. H. Evans, John R. Turner, Jim D. Bennell, Jan G. Hiddink
2018
Fine-scale depth structure of pelagic communities throughout the global ocean based on acoustic sound scattering layers Roland Hudson Proud, Martin Cox, Camille Melanie Marie-Anne Le Guen, Andrew Stuart Brierley
2018
From siphonophores to deep scattering layers: uncertainty ranges for the estimation of global mesopelagic fish biomass Roland Hudson Proud, Nils Olav Handegard, Rudy Kloser, Martin Cox, Andrew Stuart Brierley

Harbour seals avoid tidal turbine noise Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson
2018
The challenge of habitat modelling for threatened low density species using heterogeneous data Ana Maria Canadas, Natacha Aguilar de Soto, M. Aissi, A. Arcangeli, M. Azzolin, A. B-Nagy, G Bearzi, I. Campana, C. Chicote, Cedric Cotte, R. Crosti, L David, A. Di Natale, A. Frantzis, P. Garcia, M. Gazo, R. Gutierrez-Xarxa, D. Holcer, S. Laran, G. Lauriano, T Lewis, A. Moulins, B. Mussi, G. Notarbartolo di Sciara, Simone Panigada, X. Pastor, E. Politi, M. Pulcini, J.A. Raga, Luke Edward Rendell, M. Rosso, P. Tepsich, J. Tomás, M. Tringali, Th. Roger
2018
A new approach to estimate fecundity rate from inter-birth intervals Monica Arso Civil, Barbara Cheney, Paul Thompson, Philip Steven Hammond
2017
A simulation approach to assessing environmental risk of sound exposure to marine mammals Carl Robert Donovan, Catriona M Harris, Lorenzo Milazzo, John Harwood, Laura Helen Marshall,
2017
An analysis of pilot whale vocalization activity using hidden Markov models Valentin Mina Popov, Roland Langrock, Stacy Lynn De Ruiter, Fleur Visser
2017
Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill A A Hohn, Len Thomas, R. H. Carmichael, J. Litz, C. Clemons-Chevis, S. F. Shippee, C. Sinclair, S. Smith, T. R. Speakman, M. C. Tumlin, E. S. Zolman
2017
Biogeography of the global ocean's mesopelagic zone Roland Hudson Proud, Martin James Cox, Andrew Stuart Brierley
2017
Can the camera lie? A non-permanent nick in a bottlenose dolphin (Tursiops truncatus) Barbara Cheney, Paul M Thompson, Philip Steven Hammond
2017
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond
2017
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt
2017
Fine-scale harbour seal usage for informed marine spatial planning Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout
2017
Individual size, sex and rearing environment impact on aggression in newly weaned seals Kelly Joanne Robinson, Patrick Pomeroy, Neil Hazon, Simon Moss, Sean Twiss
2017
Intraseasonal temporal variation of reproductive effort for male grey seals Amanda Bishop, James Stewart, Patrick Pomeroy, Sean Twiss
2017
Late summer distribution and abundance of ice-associated whales in the Norwegian High Arctic Jade Vacquié-Garcia, Christian Lydersen, Tiago A. Marques, Jon Aars, Heidi Ahonen, Mette Skern-Mauritzen, Nils Oien, Kit M Kovacs
2017
Modelling harbour seal movements Bernie J McConnell, Sophie Caroline Smout, Mick Wu
2017
Quantifying injury to common bottlenose dolphins from the Deepwater Horizon oil spill using an age-, sex- and class-structured population model Lori H. Schwacke, Len Thomas, Randall S Wells, Wayne E. McFee, Aleta A. Hohn, Keith D. Mullin, Eric S. Zolman, Brian M. Quigley, Teri K. Rowles, John H. Schwacke
2017
Spatio-temporal variation in click production rates of beaked whales Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson
2017
Sperm whale (Physeter macrocephalus) collision with a research vessel Gregory L. Fulling, Thomas A. Jefferson, Dagmar Fertl, Juan Carlos Salinas Vega, Cornelia Sabrina Oedekoven, Stan A. Kuczaj II
2017
Survival, density, and abundance of common bottlenose dolphins in Barataria Bay (USA) following the Deepwater Horizon oil spill Trent L. McDonald, Fawn E. Hornsby, Todd R. Speakman, Eric S. Zolman, Keith D. Mullin, Carrie Sinclair, Patricia E. Rosel, Len Thomas, Lori H. Schwacke
2017
True’s beaked whale (Mesoplodon mirus) in Macaronesia Natacha Aguilar de Soto, Vidal Martin, Monica Silva, Roland Edler, Cristel Reyes, Manuel Carrillo, Agustina Schiavi, Talia Morales, Belen García-Ovide, Anna Sanchez-Mora, Nerea Garcia-Tavero, Lisa Steiner, Michael Scheer, Roland Gockel, Dylan Walker, Enrico Villa, Petra Szlama, Ida K. Eriksson, Marisa Tejedor, Monica Perez-Gil, João Quaresma, Wojtek Bachara, Emma Louise Carroll
2017
Underwater ambient noise in a baleen whale migratory habitat off the Azores Miriam Romagosa, Irma Cascão, Nathan D. Merchant, Marc O. Lammers, Eva Giacomello, Tiago A. Marques, Mónica A. Silva
2017
Aerial low frequency hearing in captive and free-ranging harbour seals (Phoca vitulina) using auditory brainstem responses Klaus Lucke, Gordon Drummond Hastie, Kerstin Ternes, Bernie J McConnell, Simon Moss, Debbie JF Russell, Heike Weber, Vincent Janik
2016
Body density and diving gas volume of the northern bottlenose whale (Hyperoodon ampullatus) Patrick Miller, Tomoko Narazaki, Saana Isojunno, Kagari Aoki, Sophie Caroline Smout, Katsufumi sato
2016
Delphinid echolocation click detection probability on near-seafloor sensors Kaitlin E. Frasier, Sean M. Wiggins, Danielle Harris, Tiago A. Marques, Len Thomas, John A. Hildebrand
2016
Dynamic habitat corridors for marine predators Gordon Drummond Hastie, Debbie JF Russell, Steven Benjamins, Simon Moss, Ben Wilson, David Thompson
2016
From physiology to policy Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas
2016
Moonlight drives ocean-scale mass vertical migration of zooplankton during the Arctic winter Kim S. Last, Laura Hobbs, Jørgen Berge, Andrew Stuart Brierley, Finlo Cottier
2016
Naval sonar disrupts foraging behaviour in humpback whales Lise D. Sivle, Paul Wensveen, Petter Kvadsheim, Frans-Peter A. Lam, Fleur Visser, Charlotte Cure, Catriona M Harris, Peter Lloyd Tyack, Patrick Miller
2016
Navigating uncertain waters: a critical review of inferring foraging behaviour from location and dive data in pinnipeds Matthew Ian Daniel Carter, Kimberley A. Bennett, Clare B. Embling, Philip J. Hosegood, Debbie JF Russell
2016
Novel application of a quantitative spatial comparison tool to species distribution data Esther Lane Jones, Luke Edward Rendell, Enrico Pirotta, Jed Long
2016
Population scaling in 5 km x 5 km grey and harbour seal usage maps. Note to Scottish Government MMSS/002/15 Esther Lane Jones, Chris Morris, Sophie Caroline Smout, Bernie J McConnell
2016
The Gulf of Ambracia’s common bottlenose dolphins (Tursiops truncatus) Joan Gonzalvo, Giancarlo Lauriano, Philip Steven Hammond, Karine A Viaud-Martinez, Maria Cristina Fossi, Ada Natoli, Letizia Marsili
2016
A description of LATTE outputs Tiago A. Marques, Len Thomas
2015
An alternative method for correcting fluorescence quenching Christophe Guinet, Marthan Bester, Andrew Stuart Brierley, Lars Boehme
2015
Inter-annual and seasonal trends in cetacean distribution, density and abundance off southern California G.S. Campbell, Len Thomas, K. Whitaker, A.B. Douglas, J. Calambokidis, J.A. Hildebrand
2015
Passive acoustic monitoring of beaked whale densities in the Gulf of Mexico John Hildebrand, Simone Baumann-Pickering, Kaitlin Frasier, Jennifer Trickey, Karlina Merkens, Sean Wiggins, Mark McDonald, Lance Garrison, Danielle Harris, Tiago A. Marques, Len Thomas
2015
Procedure description Tiago A. Marques, Jessica Shaeffer, Len Thomas
2015
Assessing performance of Bayesian state-space models fit to Argos Satellite telemetry locations processed with Kalman Filtering Monica A. Silva, Ian Jonsen, Debbie JF Russell, Rui Prieto, David Thompson, Mark F. Baumgartner
2014
Counting whales in a challenging, changing environment N. Kelly, O. Boebel, A. S. Friedlaender, H. Herr, K. -H. Kock, L. S. Lehnert, T. Maksym, J. Roberts, M. Scheidat, U. Siebert, Andrew Stuart Brierley
2014
Dose-response relationships for the onset of avoidance of sonar by free-ranging killer whales Patrick Miller, Ricardo Nuno Antunes, Paul Wensveen, Filipa Isabel Pereira Samarra, Ana Catarina De Carvalho Alves, Peter Lloyd Tyack, Petter H. Kvadsheim, Lars Kleivane, Frans-Peter A. Lam, Michael A. Ainslie, Len Thomas
2014
Fin whale survival and abundance in the Gulf of St. Lawrence, Canada Christian Ramp, J Delarue, Martine Bérubé, Philip Steven Hammond, Richard Sears
2014
Seal at-sea distribution, movements and behaviour Debbie JF Russell, Bernie J McConnell
2014
The east coast of Scotland bottlenose dolphin population Monica Arso Civil, Barbara Cheney, Valentina Islas Villanueva, Vincent Janik, Paul Thompson, Philip Steven Hammond
2014
The effectiveness of a seal scarer at a wild salmon net fishery Rob Harris, Catriona M Harris, Callan David Duck, Ian Boyd
2014
Towards collective circum-antarctic passive acoustic monitoring I. Van Opzeeland, F. Samaran, K.M. Stafford, K. Findlay, J. Gedamke, Danielle Harris, B.S. Miller
2014
First direct measurements of behavioural responses by Cuvier's beaked whales to mid-frequency active sonar Stacy Lynn De Ruiter, Brandon L. Southall, John Calambokidis, Walter M. X. Zimmer, Dinara Sadykova, Erin A. Falcone, Ari S. Friedlaender, John E. Joseph, Gregory S. Schorr, Len Thomas, Peter Lloyd Tyack
2013
The ecosystem of the Mid-Atlantic Ridge at the sub-polar front and Charlie-Gibbs Fracture Zone; ECO-MAR project strategy and description of the sampling programme 2007-2010 I.G. Priede, D.S.M. Billett, Andrew Stuart Brierley, A.R. Hoelzel, M. Inall, P.I. Miller, N.J. Cousins, M.A. Shields, T. Fujii
2013
Using hierarchical bayes to understand movement, health, and survival in the endangered North Atlantic right whale Robert Schilling Schick, Scott D. Kraus, Rosalind M. Rolland, Amy R. Knowlton, Philip K. Hamilton, Heather M. Pettis, Robert D. Kenney, James S. Clark
2013
Global coverage of cetacean line-transect surveys Kristin Kaschner, Catriona M Harris
2012
Harbour porpoise habitat preferences Saana Isojunno, Jason Matthiopoulos,
2012
Density estimation implications of increasing ambient noise on beaked whale click detection and classification Tiago A. Marques, Jessica Ward, Susan Jarvis, David Moretti, Ronald Morrissey, Nancy DiMarzio, Len Thomas
2010