Publications (PURE)

Publications

Recent publications


200  (of 427 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Ocean clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details.

2019 (21/1)

(Commissioned report)
EIRPHOT : A critical assessment of Wales’ grey seal ( Halichoerus grypus ) photo - identification database .
Izzy Langley, Chris Morris, Tom Stringell, Lex Hiby, Patrick Pomeroy 
Keywords: NERC

Environmental Pollution
vol.In press 
(Article)
Spatial variability in total and organic mercury levels in Antarctic krill Euphausia superba across the Scotia Sea
José Seco, José C. Xavier, João P. Coelho, Bárbara Pereira, Geraint Tarling, Miguel A. Pardal, Paco Bustamante, Gabriele Stowasser, Andrew Stuart Brierley, Maria E. Pereira 
Keywords: Food-web, Eggs, Organic mercury, Southern Ocean, Antarctica

Journal of the Royal Statistical Society: Series A (Statistics in Society)
vol.Early View 
(Article)
2018 (5/7)
Journal of Marine Science and Engineering
vol.6 
(Article)
2018 (4)
Journal of the Royal Statistical Society: Series C (Applied Statistics)
vol.67 pp.705-722
(Article)
2018 (5)
Marine Policy
vol.91 pp.113-121
(Article)
AIS data to inform small scale fisheries management and marine spatial planning
Mark Andrew James, Tania Cecilia Mendo Aguilar, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson 
Keywords: Monitoring, Inshore fisheries, Trips, PostgreSQL, Trajectories
2018 (26/12)
Ecology and Evolution
vol.Early View 
(Article)
Accounting for preferential sampling in species distribution models
Maria Grazia Pennino, Iosu Paradinas, Janine Baerbel Illian, Facundo Muñoz, José María Bellido, Antonio López-Quílez, David Conesa 
Keywords: Bayesian modelling, Integrated nested Laplace approximation, Point processes, Species Distribution Models (SDMs), Stochastic partial differential equation

Scientific Reports
vol.8 
(Article)
Assessing cetacean surveys throughout the Mediterranean Sea
Laura Mannocci, Jason J. Roberts, Patrick N. Halpin, Matthieu Authier, Oliver Boisseau, Mohamed Nejmeddine Bradai, Ana Cañadas, Carla Chicote, Léa David, Nathalie Di-Méglio, Caterina M. Fortuna, Alexandros Frantzis, Manel Gazo, Philip Steven Hammond, DraÅ¡ko Holcer, Kristin Kaschner, Dani Kerem, Giancarlo Lauriano, Tim Lewis, Giuseppe Notarbartolo di Sciara, Simone Panigada, Juan Antonio Raga, Aviad Scheinin, Vincent Ridoux, Adriana Vella, Joseph Vella 
2018 (24/7)
Global Ecology and Biogeography
vol.27 pp.760-786
(Article)
BioTIME
Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, DuÅ¡an Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš VrÅ¡ka, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler 
Keywords: Biodiversity, Global, Spatial, Species richness, Temporal, Turnover
2018 (12/7)
PLoS ONE
vol.13 
(Article)
Body density of humpback whales (Megaptera novaengliae) in feeding aggregations estimated from hydrodynamic gliding performance
Tomoko Narazaki, Saana Isojunno, Douglas P. Nowacek, Ari S. Friedlaender, Christian Ramp, Sophie Caroline Smout, Kagari Aoki, Volker Bernt Deecke, Katsufumi Sato, Patrick Miller 

Journal of the Royal Statistical Society: Series C (Applied Statistics)
vol.Early View 
(Article)
2018 (2)
Aquatic Conservation: Marine and Freshwater Ecosystems
vol.28 pp.216-230
(Article)
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas
Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond 
Keywords: Cetaceans, Distribution, Environmental impact assessement, Management, Marine spatial planning, Rapid assessment, Tanzania

Journal of Fish Biology
vol.Early View 
(Article)

Rapid Communications in Mass Spectrometry
vol.33 pp.176-184
(Article)
Changes in stable isotope compositions during fasting in phocid seals
sarah habran, France Damseaux, Patrick Pomeroy, Cathy Debier, Dan Crocker, Gilles Lepoint, Krishna Das 
Keywords: Stable isotopes, Seal, Lactation, Post-weaning fast, ReproductionNERC
2018 (1)
Marine Pollution Bulletin
vol.126 pp.1-18
(Review article)
Comparing methods suitable for monitoring marine mammals in low visibility conditions during seismic surveys
Ursula K. Verfuss, Douglas Michael Gillespie, Jonathan Charles David Gordon, Tiago A. Marques, Brianne Miller, Rachael Plunkett, James A. Theriault, Dominic John Tollit, Daniel P. Zitterbart, Philippe Hubert, Len Thomas 
Keywords: Marine mammals, Monitoring methods, Underwater noise, Seismic survey, Detection performance, Low visibility

Journal of the Marine Biological Association of the United Kingdom
vol.First View 
(Article)
2018 (1/12)
Avian Conservation and Ecology
vol.13 
(Article)

Marine Mammal Science
vol.34 pp.997-1017
(Article)
2018 (20/2)
Proceedings of the National Academy of Sciences of the United States of America
vol.115 pp.1843-1847
(Article)
Divergent biodiversity change within ecosystems
Anne Magurran, Amy Elizabeth Deacon, Faye Helen Moyes, Hideyasu Shimadzu, Maria Dornelas, Dawn Phillip, Indar Ramnarine 
Keywords: Biodiversity change, Tropical ecology, Freshwater, Temporal turnover, Community-level regulation

Methods in Ecology and Evolution
vol.Early View 
(Article)
Estimating effective detection area of static passive acoustic data loggers from playback experiments with cetacean vocalisations
Hanna K. Nuuttila, Katharina Brundiers, Michael Dähne, Jens C. Koblitz, Len Thomas, Winnie Courtene-Jones, Peter G. H. Evans, John R. Turner, Jim D. Bennell, Jan G. Hiddink 
Keywords: Abundance, C-POD, Density estimation, Detection function, Effective detection radius, Static passive acoustic monitoring
2018 (27/3)

(Other report)

Journal of the Acoustical Society of America
vol.143 pp.2980-2993
(Article)
2018 (28/6)
Marine Ecology Progress Series
vol.598 pp.35-48
(Article)

ICES Journal of Marine Science
vol.Advance Article 
(Article)
2018 (18/7)
Frontiers in Genetics
vol.9 
(Review article)
2018 (1/4)
Current Zoology
vol.64 pp.213-221
(Article)
2018 (3)
Journal of Applied Ecology
vol.55 pp.684-693
(Article)
Harbour seals avoid tidal turbine noise
Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson 
Keywords: Collision risk, Marine mammals, Avoidance, Renewable energy, Pinnipeds, Marine spatial planning, Underwater noise, Tidal turbines, Behavioural responsesNERC
2018 (4)
Animal Behaviour
vol.138 pp.1-8
(Article)
2018 (2)
Animal Behaviour
vol.136 pp.147-157
(Article)

Diversity and Distributions
vol.Early View 
(Article)
How to fit the distribution of apex scavengers into land‐abandonment scenarios? The Cinereous vulture in the Mediterranean biome
Isabel García‐Barón, Ainara Cortés‐Avizanda, Peter H. Verburg, Tiago A. Marques, Rubén Moreno‐Opo, Henrique M. Pereira, José A. Donázar, Lluís Brotons 
Keywords: Aegypius monachus, Socio-economies, European Union, Farmland, Land abandonment, Ecological rewilding

Statistics in Medicine
vol.Early View 
(Article)
Identifying prognostic structural features in tissue sections of colon cancer patients using point pattern analysis
Peter David Caie, Janine Baerbel Illian, Ben C. Stevenson, Anne Savage, David James Harrison, James L. Brown 
Keywords: Colorectal cancer, Palm intensity function, Spatial point patterns
2018 (10/1)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (12)
Spatial Statistics
vol.28 pp.169-193
(Article)
Level set Cox processes
Anders Hildeman, David Bolin, Jonas Wallin, Janine Baerbel Illian 
Keywords: Point process, Cox process, Level set inversion, Classification, Gaussian fields
2018 (13/12)
Endangered Species Research
vol.37 pp.269-287
(Article)
2018 (1)
Journal of Applied Ecology
vol.55 pp.396-404
(Review article)
Marine mammals and sonar
Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik 
Keywords: Sonar, Cetaceans, Human disturbance, Impact assessment, Anti-predator response, Anthropogenic noise, Behavioural response, Marine mammals, Dose response

Methods in Ecology and Evolution
vol.Early View 
(Article)
Model selection with overdispersed distance sampling data
Stephen Terrence Buckland, Marie-Lyne Després-Einspenner, Hjalmar S. Kühl 
Keywords: Animal abundance, Camera trapping, Cue counting, Distance sampling, Model selection, Overdispersion, QAIC
2018 (2)
Journal of the Acoustical Society of America
vol.143 pp.954-967
(Article)
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates
Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie 
2018 (25/7)
Proceedings of the Royal Society B: Biological Sciences
vol.285 
(Article)
2018 (1)
Oikos
vol.127 pp.134-146
(Article)
2018 (12)
Conservation Genetics
vol.19 pp.1349-1365
(Article)
2018 (4)
Acta Oecologica
vol.88 pp.41-51
(Article)
Seal carrion is a predictable resource for coastal ecosystems
Maria-Martina Quaggiotto, Philip S. Barton, Chris Morris, Simon E. W. Moss, Patrick Pomeroy, Dominic J. McCafferty,  
Keywords: Predictability, Resource subsidy, Coastal, Carcass, Pinniped, Relative standard error, ScavengerNERC
2018 (12)
Perspectives in Ecology and Conservation
vol.16 pp.186-192
(Article)
Simulating shifts in taxonomic and functional β-diversity of ray-finned fishes
Anderson Aires Eduardo, Faye Helen Moyes, Pablo Ariel Martinez, Anne Magurran, Sidney F. Gouveia 
Keywords: Actinopterygii, Biodiversity loss, Functional diversity, Nestedness, Turnover
2018 (14/2)
PLoS One
vol.13 
(Article)
Sociability between invasive guppies and native topminnows
Alfredo Fernandez Ojanguren, Omar Domínguez-Domínguez, Anne Magurran 

Wiley Interdisciplinary Reviews: Computational Statistics
vol.Early View 
(Review article)
Spatial modeling with R-INLA
Haakon Bakka, HÃ¥vard Rue, Geir-arne Fuglstad, Andrea Riebler, David Bolin, Janine Baerbel Illian, Elias Krainski, Daniel Simpson, Finn Lindgren 
Keywords: Approximate Bayesian inference, Gaussian Markov random fields, Laplace approximations, Sparse matrices, Stochastic partial differential equations
2018 (2)
Ecological Indicators
vol.85 pp.128-136
(Article)
The challenge of habitat modelling for threatened low density species using heterogeneous data
Ana Maria Canadas, Natacha Aguilar de Soto, M. Aissi, A. Arcangeli, M. Azzolin, A. B-Nagy, G Bearzi, I. Campana, C. Chicote, Cedric Cotte, R. Crosti, L David, A. Di Natale, A. Frantzis, P. Garcia, M. Gazo, R. Gutierrez-Xarxa, D. Holcer, S. Laran, G. Lauriano, T Lewis, A. Moulins, B. Mussi, G. Notarbartolo di Sciara, Simone Panigada, X. Pastor, E. Politi, M. Pulcini, J.A. Raga, Luke Edward Rendell, M. Rosso, P. Tepsich, J. Tomás, M. Tringali, Th. Roger 
Keywords: Cuvier’s beaked whales, Abundance, Distribution, Conservation, Density surface modelling, Correction factor, Mediterranean sea
2018 (13/12)
Journal of the Acoustical Society of America
vol.144 pp.3618-3626
(Article)
Two unit analysis of Sri Lankan pygmy blue whale song over a decade
Jennifer L. Miksis-Olds, Sharon L. Nieukirk, Danielle Harris 

Ecology and Evolution
vol.Early View 
(Review article)
Understanding the population consequences of disturbance
Enrico Pirotta, Daniel P. Costa, Erica Fleishman, Scott D. Kraus, David Lusseau, David Moretti, Leslie Frances New, Robert Schilling Schick, Lisa K. Schwarz, Samantha E. Simmons, Len Thomas, Peter Lloyd Tyack, Michael J. Weise, Randall S. Wells, John Harwood 
Keywords: Anthropogenic disturbance, Environmental impact assessments, Marine mammals, Nonconsumptive effects, Population consequences, Trait-mediated indirect interactions, Uncertainty

Ecology and Evolution
vol.Early View 
(Article)
Variations in age- and sex-specific survival rates help explain population trend in a discrete marine mammal population
Monica Arso Civil, Barbara Cheney, Valentina Islas-Villanueva, Jefferson Alden Graves, Vincent Janik, Paul M Thompson, Philip Steven Hammond 
Keywords: Calf survival, Capture-recapture, Mortality rate, Population dynamics, Sex-specific survival, Tursiops
2018 (2)
Oecologia
vol.186 pp.435-446
(Article)
2017 (4)
Ecosphere
vol.8 
(Article)
2017 (4)
Ecology and Evolution
vol.7 pp.2101-2111
(Article)
A simulation approach to assessing environmental risk of sound exposure to marine mammals
Carl Robert Donovan, Catriona M Harris, Lorenzo Milazzo, John Harwood, Laura Helen Marshall,  
Keywords: Agent-based models, Grey seal, Harbour porpoise, Risk assessment, Underwater sound
2017 (1/7)
Aquaculture
vol.476 pp.59-64
(Article)
2017 (14/8)
Conservation Letters
vol.10 pp.459-468
(Article)
Addressing uncertainty in marine resource management; combining community engagement and tracking technology to characterize human behavior
Kristian Metcalfe, Tim Collins, Kirsten E. Abernethy, Richard Boumba, Jean-Claude Dengui, Ricky Miyalou, Richard J. Parnell, Kate E. Plummer, Debbie JF Russell, Gilbert Koumba Safou, Dominic Tilley, Rachel A. Turner, Hilde Vanleeuwe, Matthew J. Witt, Brendan J. Godley 
Keywords: Africa, Artisanal fisheries, Behaviour, Fisheries management, Marine spatial planning, Participatory data collection, Resource use, Small-scale fisheries
2017 (1)
Journal of the Acoustical Society of America
vol.141 pp.159-171
(Article)
An analysis of pilot whale vocalization activity using hidden Markov models
Valentin Mina Popov, Roland Langrock, Stacy Lynn De Ruiter, Fleur Visser 
2017 (9)
Flora
vol.234 pp.1-6
(Article)
2017 (23/1)
Environmental Sciences Europe
vol.29 
(Article)
An experiment of the impact of a neonicotinoid pesticide on honeybees
Robert Schilling Schick, Jeremy John Greenwood, Stephen Terrence Buckland 
Keywords: Thiamethoxam, Honeybee, Field experiment, Neonicotinoids, Critical review
2017 (10/8)
Endangered Species Research
vol.34 pp.149-165
(Article)
Animal Counting Toolkit
Katie Gaut, Rowenna Gryba, Jeffrey Moore, Eric Rexstad, Doug Sandilands, Justin Steventon, Randall Reeves 
Keywords: Abundance, Boat, Bycatch, Capacity, Conservation, Dolphin
2017 (5/5)

(Commissioned report)
2017 (31/1)
Endangered Species Research
vol.33 pp.235-252
(Article)
Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill
A A Hohn, Len Thomas, R. H. Carmichael, J. Litz, C. Clemons-Chevis, S. F. Shippee, C. Sinclair, S. Smith, T. R. Speakman, M. C. Tumlin, E. S. Zolman 
Keywords: Carbon, Gulf of Mexico, Nitrogen, Stock structure, Sulfur, Tursiops truncatusEcology, Nature and Landscape Conservation
2017 (12)
Methods in Ecology and Evolution
vol.8 pp.1690-1702
(Article)
2017 (3)
Annual Review of Statistics and its Application
vol.4 pp.395-421
(Review article)
Bayesian computing with INLA
Haavard Rue, Andrea Riebler, Sigrunn H. Sørbye, Janine Baerbel Illian, Daniel P. Simpson, Finn K. Lindgren 
Keywords: Gaussian Markov random field, Laplace approximations, Approximate Bayesian inference, Latest Gaussian models, Numerical integration, Sparse matrices
2017 (3/1)
The Bulletin of the Ecological Society of America
vol.98 pp.57-63
(Article)
Best practices for virtual participation in meetings
Stephanie E. Hampton, Benjamin S. Halpern, Marten Winter, Jennifer K. Balch, John N. Parker, Jill S. Baron, Margaret Palmer, Mark P. Schildhauer, Pamela Bishop, Thomas Robert Meagher, Alison Specht 
2017 (9/1)
Current Biology
vol.27 pp.113-119
(Article)
2017 (12/3)
Aquatic Mammals
vol.43 pp.156-161
(Article)
2017 (26/7)
Science Advances
vol.3 
(Article)
Community-level regulation of temporal trends in biodiversity
Nicholas Gotelli, Hideyasu Shimadzu, Maria Dornelas, Brian McGill, Faye Helen Moyes, Anne Magurran 
2017 (6)
Journal of Applied Ecology
vol.54 pp.894-902
(Article)
Counting chirps
G. John Measey, Ben Stevenson, tanya scott, Res Altwegg, David Louis Borchers 
Keywords: Acoustic spatially explicit capture-recapture, Signal strength, Time of arrival, Triangulation, Anurans
2017 (16/8)
Journal of Experimental Biology
vol.220 pp.2878-2886
(Article)
Determining the behavioural dose-response relationship of marine mammals to air gun noise and source proximity
Rebecca A. Dunlop, Michael J. Noad, Robert D. McCauley, Lindesay Alexandra Sarah Scott-Hayward, Eric Kniest, Robert Slade, David Paton, Douglas H. Cato 
Keywords: Anthropogenic noise, Behavioural response study, Received level, Humpback whale, Seismic air gun
2017 (1)
Marine Mammal Science
vol.33 pp.59-79
(Article)
2017 (15/6)
Biometrics
vol.73 pp.593-602
(Article)
2017 (11)
Methods in Ecology and Evolution
vol.8 pp.1558-1565
(Article)
Distance sampling with camera traps
Stephen Terrence Buckland, Marie-Lyne Despres-Einspenner, Hjalmar Kuhn 
Keywords: Animal abundance, Camera trapping, Density, Distance sampling, Maxwell's duiker
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.8-19
(Article)
Distribution, abundance and habitat use of deep diving cetaceans in the North-East Atlantic
Emer Rogan, Ana Cañadas, Kelly Macleod, M. Begoña Santos, Bjarni Mikkelsen, Ainhize Uriarte, Olivier Van Canneyt, José Antonio Vázquez, Philip Steven Hammond 
Keywords: Design-based abundance, Model-based abundance, Beaked whales, Sperm whales, Pilot whales, Distribution, Deep divers, Habitat models
2017 (1/6)
General and Comparative Endocrinology
vol.247 pp.53-65
(Article)
2017 (2)
Ecology
vol.98 pp.583-590
(Article)
Estimates of local biodiversity change over time stand up to scrutiny
Mark Vellend, Maria Dornelas, Lander Baeten, Robin Beauséjour, Carissa D. Brown, Pieter De Frenne, Sarah C. Elmendorf, Nicholas J Gotelli, Faye Helen Moyes, Isla H. Myers-Smith, Anne Magurran, Brian J. McGill, Hideyasu Shimadzu,  
Keywords: Biodiversity, Meta-analysis, Species richness, Temporal change
2017 (7)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.141 pp.41-58
(Article)
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys
Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt 
2017 (9)
Environmental and Ecological Statistics
vol.24 pp.399-414
(Article)
2017 (7)
Environmental Biology of Fishes
vol.100 pp.839-849
(Article)
Evaluating detectability of freshwater fish assemblages in tropical streams
Amy Elizabeth Deacon, Rajindra Mahabir, Devan Inderlall, Indar W. Ramnarine, Anne Magurran 
Keywords: Trinidad, Electrofishing, Alpha diversity, Detectability, Species richness, Sampling methods, Gear bias
2017
vol.194 pp.231-239
(Conference contribution)
2017 (12/10)
Conservation Letters
vol.10 pp.588-595
(Letter)
Extinction is imminent for Mexico’s endemic porpoise unless fishery bycatch is eliminated
Barbara L Taylor, Lorenzo Rojas-Bracho, Jeffrey Moore, Armando Jaramillo-Legorreta, Jay M Ver Hoef, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Jay Barlow, Tim Gerrodette, Nicholas Tregenza, Len Thomas, Philip Steven Hammond 
Keywords: Extinction, Illegal fishing, Line transect, Phocoena sinus, Totoaba macdonaldi, Vaquita abundance , Passive acoustic monitoring , C-POD
2017 (1/6)
Conservation Biology
vol.31 pp.601-614
(Article)
2017 (14/9)
Scientific Reports
vol.7 
(Article)
Fine-scale harbour seal usage for informed marine spatial planning
Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout 
2017 (10)
Advances in Statistical Analysis
vol.101 pp.475-494
(Article)
2017 (28/4)
Geophysical Research Letters
vol.44 pp.3841-3848
(Article)
Global warming and ocean stratification
Manoj Joshi, Roland von Glasow, Robin S. Smith, Charles G. M. Paxton, Amanda C. Maycock, Daniel J. Lunt, Claire Loptson, Paul Markwick 
Keywords: Climate dynamics, Asteroid impact, Meteor impact, Radiative forcing, K-Pg boundary, NeoproterozoicAtmospheric Science
2017

(Other report)
Harbour Seal Decline – vital rates and drivers.
Monica Arso Civil, Sophie Caroline Smout, David Thompson, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Callan David Duck, Chris Morris, Caroline Cummings, Bernie J McConnell, Ailsa Jane Hall 
Keywords: Scottish Government
2017 (7/6)
Royal Society Open Science
vol.4 
(Article)
Impact of wild prey availability on livestock predation by snow leopards
Kulbhushansingh R. Suryawanshi, Stephen M. Redpath, Yash Veer Bhatnagar, Uma Ramakrishnan, Vaibhav Chaturvedi, Sophie Caroline Smout, Charudutt Mishra 
Keywords: Apparent competition, Apparent facilitation, Conservation conflicts, Indirect interactions, Predator, Prey interactions, Snow leopardGeneral
2017 (10)
Advances in Statistical Analysis
vol.101 pp.495-520
(Article)

Journal of the American Statistical Association

(Article)
Incorporating animal movement into distance sampling
Richard Glennie, Stephen Terrence Buckland, Roland Langrock, Tim Gerrodette, Lisa Ballance, Susan Chivers, Michael Scott, William Perrin 
Keywords: Abundance, Distance sampling, Animal movement
2017 (4)
Marine Mammal Science
vol.33 pp.621-629
(Article)
Individual size, sex and rearing environment impact on aggression in newly weaned seals
Kelly Joanne Robinson, Patrick Pomeroy, Neil Hazon, Simon Moss, Sean Twiss 
Keywords: NERC
2017 (12)
Ecosphere
vol.8 
(Article)
Individual, ecological, and anthropogenic influences on activity budgets of long-finned pilot whales
Saana Isojunno, Dinara Sadykova, Stacy Lynn De Ruiter, Charlotte Curé, Fleur Visser, Len Thomas, Patrick Miller, Catriona M Harris 
Keywords: Anthropogenic noise, Activity synchrony, Benthic habitat, Deep diving mammal, DTAG, Ethogram, Globicephala melas, Hidden Markov model, Naval sonar
2017 (12)
Animal Behaviour
vol.134 pp.167-175
(Article)

Scientific Reports
vol.7 
(Article)
Intrinsic and extrinsic factors drive ontogeny of early-life at-sea behaviour in a marine top predator
Matthew Ian Daniel Carter, Debbie JF Russell, Clinton John Blight, David Thompson, Philip J. Hosegood,  
2017 (11)
Journal of the Acoustical Society of America
vol.142 pp.EL512-EL517
(Article)
Last call: Passive acoustic monitoring shows continued rapid decline of critically endangered vaquita
Len Thomas, Armando Jaramillo-legorreta, Gustavo Cardenas-hinojosa, Edwyna Nieto-garcia, Lorenzo Rojas-bracho, Jay M. Ver Hoef, Jeffrey Moore, Barbara Taylor, Jay Barlow, Nicholas Tregenza 
2017 (7/2)
Endangered Species Research
vol.32 pp.59-70
(Article)
Late summer distribution and abundance of ice-associated whales in the Norwegian High Arctic
Jade Vacquié-Garcia, Christian Lydersen, Tiago A. Marques, Jon Aars, Heidi Ahonen, Mette Skern-Mauritzen, Nils Oien, Kit M Kovacs 
Keywords: Abundance, Arctic, Belugas, Bowhead whales, Climate change, Distribution, Narwhals, Svalbard, White whales
2017
vol.27 
(Conference contribution)
2017 (8/3)
PLoS One
vol.12 
(Article)
Low tortoise abundances in pine forest plantations in forest-shrubland transition areas
Roberto C. Rodríguez-Caro, Cornelia Sabrina Oedekoven, Eva Graciá, José D. Anadón, Stephen Terrence Buckland, Miguel A. Esteve-Selma, Julia Martinez, Andrés Giménez 
2017 (10)
Advances in Statistical Analysis
vol.101 pp.461-474
(Article)
2017 (16/1)
Agriculture, Ecosystems & Environment
vol.237 pp.280-289
(Article)
2017 (11/10)
vol.8 
(Commissioned report)
Modelling harbour seal movements
Bernie J McConnell, Sophie Caroline Smout, Mick Wu 
Keywords: Individual based model , Seals, TelemetryScottish Government
2017 (10)
Biological Conservation
vol.214 pp.23-34
(Article)

Biometrics

(Article)
Open population maximum likelihood spatial capture-recapture
Richard Glennie, David Louis Borchers, Matthew Murchie, Bart Harmsen, Rebecca Foster 
Keywords: Abundance, Survival, Spatial capture-recapture, Open population models
2017 (5/6)
Current Biology
vol.27 pp.R478
(Article)
Plankton
Andrew Stuart Brierley 

Frontiers in Plant Science
vol.8 
(Article)
2017 (12)
Annals of Applied Statistics
vol.11 pp.2270-2297
(Article)
Point process models for spatio-temporal distance sampling data from a large-scale survey of blue whales
Joyce Yuan , F. E. Bachl, F. Lindgren, David Louis Borchers, Janine Baerbel Illian, Stephen Terrence Buckland, H Rue, T. Gerrodette 
2017 (31/5)
Proceedings of the Royal Society B: Biological Sciences
vol.284 
(Article)
2017 (10)
Evolutionary Ecology
vol.31 pp.619–633
(Article)
2017 (2)
Global Ecology and Biogeography
vol.26 pp.203-215
(Article)
2017 (31/1)
Endangered Species Research
vol.33 pp.265-279
(Article)
2017 (23/11)
Scientific Reports
vol.7 
(Article)
Rapid changes in Atlantic grey seal milk from birth to weaning – immune factors and indicators of metabolic strain
Amanda D. Lowe, Sami Bawazeer, David G. Watson, Suzanne McGill, Richard J.S. Burchmore, Patrick Pomeroy, Malcolm W. Kennedy 
Keywords: NERC
2017 (6)
Animal Conservation
vol.20 pp.282-293
(Article)
Rebuilding beluga stocks in West Greenland
M. P. Heide-Jørgensen, R. G. Hansen, S. Fossette, N. H. Nielsen, David Louis Borchers, H. Stern, L. Witting 
Keywords: Aerial survey, Bayesian assessment, Hidden Markov model, Line transect, Beluga, Sea ice cover, Abundance estimates, Cetaceans
2017 (1/11)

(Chapter)
Reproductive behaviour
Patrick Pomeroy, Sean Twiss, Kelly Joanne Robinson 
Keywords: NERC
2017 (2/2)
vol.602 
(Commissioned report)
Review of analytical approaches for identifying usage and foraging areas at sea for harbour seals
Esther Lane Jones, Sophie Caroline Smout, Debbie JF Russell, Eunice Pinn, Bernie J McConnell 
Keywords: JNCC
2017 (12)
Journal of Applied Ecology
vol.54 pp.1930-1940
(Article)
Seals and shipping
Esther Lane Jones, Gordon Drummond Hastie, Sophie Caroline Smout, Joseph Onoufriou, Nathan Merchant, Kate Brookes, David Thompson 
Keywords: Halichoerus grypus, Phoca vitulina, Spatial overlap, AIS, Telemetry, Acoustic propagation, Marine stressor, MSFD, Noise pollution, UncertaintyNERC
2017 (2)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.136 pp.85-97
(Article)
2017 (15/1)
Marine Pollution Bulletin
vol.114 pp.372-383
(Article)
Shipping noise in a dynamic sea
F. Chen, G. I. Shapiro, K. A. Bennett, S. N. Ingram, David Thompson, C. Vincent, Debbie JF Russell, C. B. Embling 
Keywords: Anthropogenic noise, Marine animals, Sound propagation, Acoustic modelling, Ocean fronts

Scientific Reports
vol.7 
(Article)
Spatial distribution of citizen science casuistic observations for different taxonomic groups
Patrícia Tiago, Ana Ceia-Hasse, Tiago A. Marques, César Capinha, Henrique M. Pereira 
2017 (3)
Journal of the Acoustical Society of America
vol.141 pp.1962-1974
(Article)
Spatio-temporal variation in click production rates of beaked whales
Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson 
Keywords: Arts and Humanities (miscellaneous), Acoustics and Ultrasonics
2017 (10/7)
Aquatic Mammals
vol.43 pp.421-429
(Article)
Sperm whale (Physeter macrocephalus) collision with a research vessel
Gregory L. Fulling, Thomas A. Jefferson, Dagmar Fertl, Juan Carlos Salinas Vega, Cornelia Sabrina Oedekoven, Stan A. Kuczaj II 
2017 (31/1)
Endangered Species Research
vol.33 pp.193-209
(Article)
Survival, density, and abundance of common bottlenose dolphins in Barataria Bay (USA) following the Deepwater Horizon oil spill
Trent L. McDonald, Fawn E. Hornsby, Todd R. Speakman, Eric S. Zolman, Keith D. Mullin, Carrie Sinclair, Patricia E. Rosel, Len Thomas, Lori H. Schwacke 
Keywords: Capture-recapture, Photo-identification, Robust design, Spatial-capture model, Tursiops truncatusEcology, Nature and Landscape Conservation
2017 (8)
Bioscience
vol.67 pp.750-759
(Article)
Synthesis centers as critical research infrastructure
Jill Baron, Alison Specht, Eric Garnier, Pamela Bishop, Andrew Campbell, Frank Davis, Bruno Fady, Dawn Field, Louis Gross, Siddeswara Guru, Benjamin Halpern, Stephanie Hampton, Peter Leavitt, Thomas Robert Meagher, Jean Ometto, John Parker, Richard Price, Casey Rawson, Allen Rodrigo, Laura Sheble, Marten Winter 
Keywords: Synthesis, Collaboration, Interdisciplinary research
2017 (2)
Deep Sea Research Part II: Topical Studies in Oceanography
vol.136 pp.108-121
(Article)
2017 (7/3)
BMC Biology
vol.15 
(Comment/debate)

Polar Research
vol.36 
(Article)
The number and distribution of polar bears in the western Barents Sea
Jon Aars, Tiago A. Marques, Karen Lone, Magnus Andersen, Øystein Wiig, Ida Marie Bardalen Fløystad, Snorre B. Hagen, Stephen Terrence Buckland 
Keywords: Ursus maritimus, Distance sampling, Sea ice, Habitat loss, Svalbard, Helicopter
2017 (7/3)
PeerJ
vol.5 
(Article)
True’s beaked whale (Mesoplodon mirus) in Macaronesia
Natacha Aguilar de Soto, Vidal Martin, Monica Silva, Roland Edler, Cristel Reyes, Manuel Carrillo, Agustina Schiavi, Talia Morales, Belen García-Ovide, Anna Sanchez-Mora, Nerea Garcia-Tavero, Lisa Steiner, Michael Scheer, Roland Gockel, Dylan Walker, Enrico Villa, Petra Szlama, Ida K. Eriksson, Marisa Tejedor, Monica Perez-Gil, João Quaresma, Wojtek Bachara, Emma Louise Carroll 
Keywords: Ziphiidae, Cytochrome b, mtDNA, Genetics, Colouration patterns, Phenotype, North Atlantic, Cetacean distribution, Canary Islands, Azores
2017 (25/4)
Frontiers in Marine Science
vol.4 
(Article)
Underwater ambient noise in a baleen whale migratory habitat off the Azores
Miriam Romagosa, Irma Cascão, Nathan D. Merchant, Marc O. Lammers, Eva Giacomello, Tiago A. Marques, Mónica A. Silva 
Keywords: Underwater noise, Ship noise, Baleen whale, MSFD, Open ocean environment
2017 (21/12)

(Commissioned report)
2017
vol.OESEA-15-65 
(Commissioned report)
2017 (12)
Behavioral Ecology and Sociobiology
vol.71 
(Article)
Vocal foragers and silent crowds
Fleur Visser, Annebelle C.M. Kok, Machiel G. Oudejans, Lindesay Alexandra Sarah Scott-Hayward, Stacy Lynn De Ruiter, Ana Catarina De Carvalho Alves, Ricardo Nuno Antunes, Saana Isojunno, Graham J. Pierce, Hans Slabbekoorn, Jef Huisman, Patrick Miller 
Keywords: Acoustic tags, Animal communication, Call, Foraging, Pilot whale, Social behaviourEcology, Evolution, Behavior and Systematics, Animal Science and Zoology
2017 (27/12)
Marine Ecology Progress Series
vol.585 pp.213-227
(Article)
Whale distribution in a breeding area
Daniel Danilewicz, Philip Steven Hammond, Len Thomas, Alexandre N Zerbini 
Keywords: Shelter, Conservation, Density surface model, Cetacean, Line transect, Reproduction
2017 (14/7)

(Book)
Whales
Philip Steven Hammond, Sonja Heinrich, Sascha Kate Hooker, Peter Lloyd Tyack 
2016 (5)
Statistical Science
vol.31 pp.141
(Editorial)
50-Year Anniversary of Papers by Cormack, Jolly and Seber
Stephen Terrence Buckland, Byron J T Morgan 
2016 (5)
Statistical Science
vol.31 pp.142-150
(Article)
A conversation with Richard M. Cormack
Stephen Terrence Buckland 
2016 (10)
European Journal of Wildlife Research
vol.62 pp.577–587
(Article)
2016 (21/3)
PLoS One
vol.11 pp.1-16
(Article)
Abundance and distribution of sperm whales in the Canary Islands
Andrea Fais, Tim P. Lewis, Daniel P. Zitterbart, Omar Álvarez, Ana Tejedor, Natacha Aguilar de Soto 
2016 (8)

(Commissioned report)
2016 (12)
Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology
vol.202 pp.859-868
(Article)
Aerial low frequency hearing in captive and free-ranging harbour seals (Phoca vitulina) using auditory brainstem responses
Klaus Lucke, Gordon Drummond Hastie, Kerstin Ternes, Bernie J McConnell, Simon Moss, Debbie JF Russell, Heike Weber, Vincent Janik 
Keywords: Harbour seal , Phoca vitulina, Hearing, ABR, Low-frequencyNERC
2016 (19/5)
PLoS One
vol.11 pp.1-16
(Article)
An efficient acoustic density estimation method with human detectors applied to gibbons in Cambodia
Benjamin M. Rawson, David Louis Borchers, Ben Stevenson, Tiago A. Marques, Len Thomas 
2016 (1/6)

(Commissioned report)
2016 (12)
Journal of Applied Ecology
vol.53 pp.1642-1652
(Article)
Avoidance of wind farms by harbour seals is limited to pile driving activities
Debbie JF Russell, Gordon Drummond Hastie, David Thompson, Vincent Janik, Philip Steven Hammond, Lindesay Alexandra Sarah Scott-Hayward, Jason Matthiopoulos, Esther Lane Jones, Bernie J McConnell 
Keywords: Complex Region Spatial Smoother, Disturbance, Marine renewables, Marine spatial planning, Pinnipeds, Renewable energy, Spatially Adaptive Local Smoothing Algorithm, Spatially adaptive smoothing , Underwater noiseNERC
2016 (17/8)
Journal of Experimental Biology
vol.219 pp.2458-2468
(Article)
2016 (5)
Aquatic Mammals
vol.42 pp.137-143
(Article)
Cannibalism by a male grey seal (Halichoerus grypus) in the North Sea
Amanda Bishop, Patrick Pomeroy, Sean Twiss 
Keywords: NERC
2016 (3)
Annals of Applied Statistics
vol.10 pp.264-285
(Article)
2016 (9)
Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology
vol.199 pp.50-57
(Article)
2016 (3)
Biological Conservation
vol.195 pp.226-234
(Article)
2016 (15/3)
Journal of Scientific Exploration
vol.30 pp.16-26
(Article)
2016 (9)
Journal of the Acoustical Society of America
vol.140 pp.1918-1930
(Article)
Delphinid echolocation click detection probability on near-seafloor sensors
Kaitlin E. Frasier, Sean M. Wiggins, Danielle Harris, Tiago A. Marques, Len Thomas, John A. Hildebrand 
Keywords: Arts and Humanities (miscellaneous), Acoustics and Ultrasonics
2016 (21/9)
Journal of Experimental Biology
vol.219 pp.2898-2907
(Article)
Discrimination of fast click series produced by tagged Risso’s dolphins (Grampus griseus) for echolocation or communication
Patricia Arranz Alonso, Stacy Lynn De Ruiter, Alison Stimpert, Ari Friedlaender, Jeremy Goldbogen, Fleur Visser, John Calambokidis, Brandon Southall, Peter Lloyd Tyack 
Keywords: Biosonar, Pulsed sound, Buzz, Burst pulse, Jerk, Foraging behavior
2016 (12)
Behavioral Ecology and Sociobiology
vol.70 pp.2161–2174
(Article)
Dynamic habitat corridors for marine predators
Gordon Drummond Hastie, Debbie JF Russell, Steven Benjamins, Simon Moss, Ben Wilson, David Thompson 
Keywords: Foraging, Marine mammal, Oceanographic, Predator, Pinniped, DivingNERC
2016 (10/3)
BMC Cancer
vol.16 
(Article)
Dynamic modulation of phosphoprotein expression in ovarian cancer xenograft models
Simon Langdon, Charlene Kay, Kyle Francis, David James Harrison, V Anne Smith 
Keywords: Ovarian cancer, Carboplatin, Pacltaxel, Xenograft, Prognosis, Phosphoproteins
2016 (13/7)
Methods in Ecology and Evolution
vol.7 pp.762-769
(Article)
Echolocation detections and digital video surveys provide reliable estimates of the relative density of harbour porpoises
Laura D. Williamson, Kate L. Brookes, Beth E. Scott, Isla M. Graham, Gareth Bradbury, Philip Steven Hammond, Paul M. Thompson 
Keywords: Abundance, Acoustics, Availability, C-POD, Density surface modelling, Digital survey, Distance sampling, Harbour porpoise
2016 (21/3)
Marine Ecology Progress Series
vol.546 pp.271-276
(Article)
Enhanced pelagic biomass around coral atolls
Tom B. Letessier, Martin J. Cox, Jessica J. Meeuwig, Philipp H. Boersch-Supan, Andrew Stuart Brierley 
Keywords: Oceanic, Acoustic scatterers, Seamount, Tuna, Reserve, Coral reefsAquatic Science, Ecology, Ecology, Evolution, Behavior and Systematics
2016 (15/12)

(Commissioned report)
Fine-scale harbour seal at-sea usage around Orkney and the North coast of Scotland
Esther Lane Jones, Sophie Caroline Smout, Clinton John Blight, Carol Elizabeth Sparling, Bernie J McConnell 
Keywords: Scottish Government
2016 (8)
Climatic Change
vol.137 pp.495-509
(Article)
Foraging behaviour, swimming performance and malformations of early stages of commercially important fishes under ocean acidification and warming
Marta S. Pimentel, Filipa Faleiro, Tiago A. Marques, Regina Bispo, Gisela Dionísio, Ana M. Faria, Jorge Machado, Myron A. Peck, Hans Pörtner, Pedro Pousão-Ferreira, Emanuel J. Goncalves, Rui Rosa 
Keywords: Global and Planetary Change, Atmospheric Science
2016 (12)
Proceedings of Meetings on Acoustics
vol.27 
(Review article)
From physiology to policy
Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas 
2016 (8)
Marine Policy
vol.70 pp.58-64
(Article)
2016 (3)
Biometrika
vol.103 pp.49-70
(Article)
2016

(Commissioned report)
2016 (6)

(Commissioned report)
Harbour Seal Decline - vital rates and drivers
Monica Arso Civil, Sophie Caroline Smout, Callan David Duck, Chris Morris, Joseph Onoufriou, David Thompson, Andrew Brownlow, Nicholas Davison, Caroline Cummings, Patrick Pomeroy, Bernie J McConnell, Ailsa Jane Hall 
Keywords: Harbour seal, Population Dynamics, Population decline, Bayesian approach, Photo-identification, TelemetryScottish Government, NERC
2016

(Commissioned report)
2016 (12)
Ecology and Evolution
vol.6 pp.8515-8525
(Article)
2016

(Other report)
Independent estimates of grey seal population size: 2008 and 2014
Debbie JF Russell, Callan David Duck, Chris Morris, David Thompson 
Keywords: SCOS
2016

(Commissioned report)
Investigations into the interactions between harbour seals (Phoca vitulina) and vessels in the inner Moray Firth
Joseph Onoufriou, Esther Lane Jones, Gordon Drummond Hastie, David Thompson 
Keywords: Scottish Government
2016 (11)
Journal of Ecology
vol.104 pp.1819-1828
(Article)
2016 (16/9)

(Conference contribution)
MLCut
A Vogogias, J Kennedy, D Archaumbault, V Anne Smith, Hannah Currant 
2016 (29/7)

(Commissioned report)
Marine Renewable Energy MRE1 Annual Report
Bernie J McConnell, Sophie Caroline Smout, Mick Wu, David Thompson, Phil Irving, Gordon Drummond Hastie 
Keywords: Scottish Government
2016

(Other report)
Marine Strategy Framework Directive. Estimating the European Grey Seal population
Debbie JF Russell, Nora Nell Hanson, Len Thomas 
Keywords: SCOS
2016 (1)
Biometrical Journal
vol.58 pp.222-239
(Article)
2016 (3)
Journal of Agricultural, Biological and Environmental Statistics
vol.21 pp.58-75
(Article)
Model-based distance sampling
Stephen Terrence Buckland, Cornelia Sabrina Oedekoven, David Louis Borchers 
Keywords: Distance sampling, Line transect sampling, Model-based inference, Point transect sampling
2016 (25/1)
Current Biology
vol.26 pp.244-251
(Article)
Moonlight drives ocean-scale mass vertical migration of zooplankton during the Arctic winter
Kim S. Last, Laura Hobbs, Jørgen Berge, Andrew Stuart Brierley, Finlo Cottier 
2016
vol.OESEA - 14 - 47  
(Commissioned report)
2016 (1/1)
Advances in Experimental Medicine and Biology
vol.875 pp.425-430
(Article)
Multiple-pulse sounds and seals: results of a harbour seal (Phoca vitulina) telemetry study during windfarm construction
Gordon Drummond Hastie, Debbie JF Russell, Bernie J McConnell, David Thompson, Vincent Janik 
Keywords: NERC
2016 (29/12)
Marine Ecology Progress Series
vol.562 pp.211-220
(Article)
Naval sonar disrupts foraging behaviour in humpback whales
Lise D. Sivle, Paul Wensveen, Petter Kvadsheim, Frans-Peter A. Lam, Fleur Visser, Charlotte Cure, Catriona M Harris, Peter Lloyd Tyack, Patrick Miller 
Keywords: Humpback whale, Megaptera novaeangliae, Naval sonar, Behavioral response, Lung feeding
2016 (26/10)
Movement Ecology
vol.4 
(Review article)
2016 (28/4)
Scientific Reports
vol.6 pp.1-10
(Article)
Neonicotinoids target distinct nicotinic acetylcholine receptors and neurons, leading to differential risks to bumblebees
Christopher Moffat, Stephen Terrence Buckland, Andrew J. Samson, Robin McArthur, Victor Chamosa Pino, Karen A. Bollan, Jeffrey T. -J. Huang, Christopher N. Connolly 
2016 (11)
Ecological Indicators
vol.70 pp.67-76
(Article)
2016 (20/5)
Aquatic Mammals
vol.42 pp.144-161
(Article)
2016 (14/10)

(Commissioned report)
Population scaling in 5 km x 5 km grey and harbour seal usage maps. Note to Scottish Government MMSS/002/15
Esther Lane Jones, Chris Morris, Sophie Caroline Smout, Bernie J McConnell 
Keywords: Scottish Government
2016 (6)
Fisheries Research
vol.178 pp.101-113
(Article)
Purse-seine vessels as platforms for monitoring the population status of dolphin species in the eastern tropical Pacific Ocean
Cleridy E. Lennert-Cody, Mark N. Maunder, Paul C. Fiedler, Mihoko Minami, Tim Gerrodette, Jeremy Rusin, Carolina V. Minte-Vera, Michael Scott, Stephen Terrence Buckland 
Keywords: Dolphin abundance, Line-transect, CPUE, Bycatch, Generalized additive model
2016 (22/2)
Journal of Applied Ecology
vol.53 pp.469-478
(Article)
Quantifying turnover in biodiversity of British breeding birds
Phil Harrison, Joyce Yuan , Stephen Terrence Buckland, Cornelia Sabrina Oedekoven, David Andrew Elston, Mark Brewer, Alison Johnston, James Pierce-Higgins 
Keywords: Biodiversity, Breeding Bird Survey, Climate change, Farmland bird community, Species proportions, Turnover, Woodland bird community
2016 (1/12)
Ecological Applications
vol.26 pp.2374-2380
(Article)
Re-evaluation of individual diameter
Alicia Ledo, Thomas Cornulier, Janine Baerbel Illian, Yoshiko Iida, Abdul Rahman Kassim, David F. R. P. Burslem 
Keywords: Bias, Biomass, Error, Inaccuracy, Modelling, Tropical forest
2016 (3)
Biological Conservation
vol.195 pp.136-145
(Article)
Searching for trends in river dolphin abundance
Jeffrey E. Moore, Catalina Gomez-Salazar, Fernando Trujillo, M Louise Burt 
Keywords: Abundance, Cryptic, Habitat loss, River dolphin, Inia, Sotalia, Amazon, Bayesian methods, Monitoring
2016 (26/10)
PLoS One
vol.11 
(Article)
Spatial models of abundance and habitat preferences of Commerson’s and Peale’s dolphin in southern Patagonian waters
Natalia A. Dellabianca, Graham J. Pierce, Andrea Raya Rey, Gabriela Scioscia, David Lawrence Miller, Mónica A. Torres, M. Natalia Paso Viola, R. Natalie P. Goodall, Adrián C. M. Schiavini 
Keywords: Medicine(all), Biochemistry, Genetics and Molecular Biology(all), Agricultural and Biological Sciences(all)
2016 (24/6)
Scientific Reports
vol.6 
(Article)
Sperm whale predator-prey interactions involve chasing and buzzing, but no acoustic stunning
A. Fais, Mark Johnson, M. Wilson, Natacha Aguilar de Soto, P. T. Madsen 
Keywords: General
2016

(Chapter (peer-reviewed))
The Gulf of Ambracia’s common bottlenose dolphins (Tursiops truncatus)
Joan Gonzalvo, Giancarlo Lauriano, Philip Steven Hammond, Karine A Viaud-Martinez, Maria Cristina Fossi, Ada Natoli, Letizia Marsili 
Keywords: Bottlenose dolphin, Tursiops truncatus, Photo-identification, Site-fidelity, Abundance estimate