Publications (PURE)

Publications
62 (of 62 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Monitoring clear keyword filter. (source: University of St Andrews PURE)
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A balance of winners and losers in the Anthropocene Maria Dornelas, Nicholas J. Gotelli, Hideyasu Shimadzu, Faye Helen Moyes, Anne Magurran, Brian J. McGill
2019
A review of unmanned vehicles for the detection and monitoring of marine fauna Ursula K. Verfuss, Ana Sofia Aniceto, Danielle Harris, Douglas Michael Gillespie, Sophie Fielding, Guillermo Jiménez, Phil Johnston, Rachael R. Sinclair, Agnar Sivertsen, Stian A. Solbø, Rune Storvold, Martin Biuw, Roy Wyatt
2019
Effect of temporal and spatial resolution on identification of fishing activities in small-scale fisheries using pots and traps Tania Mendo, Sophie Caroline Smout, Tommaso Russo, Lorenzo D’Andrea, Mark Andrew James

Effective monitoring of freshwater fish Johannes Radinger, J. Robert Britton, Stephanie M. Carlson, Anne Magurran, Juan Diego Alcaraz-Hernández, Ana Almodóvar, Lluís Benejam, Carlos Fernández-Delgado, Graciela G. Nicola, Francisco J. Oliva-Paterna, Mar Torralva, Emili García-Berthou

AIS data to inform small scale fisheries management and marine spatial planning Mark Andrew James, Tania Mendo, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson
2018
Basin-scale distribution of harbour porpoises in the Baltic Sea provides basis for effective conservation actions Ida Carlén, Len Thomas, Julia Carlström, Mats Amundin, Jonas Teilmann, Nick Tregenza, Jakob Tougaard, Jens C. Koblitz, Signe Sveegaard, Daniel Wennerberg, Olli Loisa, Michael Dähne, Katharina Brundiers, Monika Kosecka, Line Anker Kyhn, Cinthia Tiberi Ljungqvist, Iwona Pawliczka, Radomil Koza, Bartlomiej Arciszewski, Anders Galatius, Martin Jabbusch, Jussi Laaksonlaita, Jussi Niemi, Sami Lyytinen, Anja Gallus, Harald Benke, Penina Blankett, Krzysztof E. Skóra, Alejandro Acevedo-Gutiérrez
2018
BioTIME Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, Dušan Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Miguel Maria Borges Da Costa Guint Barbosa, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš Vrška, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler
2018
Comparing methods suitable for monitoring marine mammals in low visibility conditions during seismic surveys Ursula K. Verfuss, Douglas Michael Gillespie, Jonathan Charles David Gordon, Tiago A. Marques, Brianne Miller, Rachael Plunkett, James A. Theriault, Dominic John Tollit, Daniel P. Zitterbart, Philippe Hubert, Len Thomas
2018
Estimating effective detection area of static passive acoustic data loggers from playback experiments with cetacean vocalisations Hanna K. Nuuttila, Katharina Brundiers, Michael Dähne, Jens C. Koblitz, Len Thomas, Winnie Courtene-Jones, Peter G. H. Evans, John R. Turner, Jim D. Bennell, Jan G. Hiddink
2018
Fin whale density and distribution estimation using acoustic bearings derived from sparse arrays Danielle Harris, Jennifer L. Miksis-Olds, Julia A. Vernon, Len Thomas
2018
Marine mammals and sonar Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik
2018
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie
2018
Weather-driven change in primary productivity explains variation in the amplitude of two herbivore population cycles in a boreal system Joshua H. Schmidt, Eric Rexstad, Carl A. Roland, Carol L. McIntyre, Margaret C. MacCluskie, Melanie J. Flamme
2018
Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill A A Hohn, Len Thomas, R. H. Carmichael, J. Litz, C. Clemons-Chevis, S. F. Shippee, C. Sinclair, S. Smith, T. R. Speakman, M. C. Tumlin, E. S. Zolman
2017
Counting chirps G. John Measey, Ben Stevenson, tanya scott, Res Altwegg, David Louis Borchers
2017
Estimating cetacean density and abundance in the Central and Western Mediterranean Sea through aerial surveys Simone Panigada, Giancarlo Lauriano, Greg Donovan, Nino Pierantonio, Ana Cañadas, José Antonio Vázquez, M Louise Burt
2017
Evaluating detectability of freshwater fish assemblages in tropical streams Amy Elizabeth Deacon, Rajindra Mahabir, Devan Inderlall, Indar W. Ramnarine, Anne Magurran
2017
Extinction is imminent for Mexico’s endemic porpoise unless fishery bycatch is eliminated Barbara L Taylor, Lorenzo Rojas-Bracho, Jeffrey Moore, Armando Jaramillo-Legorreta, Jay M Ver Hoef, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Jay Barlow, Tim Gerrodette, Nicholas Tregenza, Len Thomas, Philip Steven Hammond
2017
Last call: Passive acoustic monitoring shows continued rapid decline of critically endangered vaquita Len Thomas, Armando Jaramillo-legorreta, Gustavo Cardenas-hinojosa, Edwyna Nieto-garcia, Lorenzo Rojas-bracho, Jay M. Ver Hoef, Jeffrey Moore, Barbara Taylor, Jay Barlow, Nicholas Tregenza
2017
Monitoring the biodiversity of regions Stephen Terrence Buckland, Alison Johnston
2017
Passive acoustic monitoring of the decline of Mexico's critically endangered vaquita Armando Jaramillo-Legorreta, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Lorenzo Rojas-Bracho, Jay Ver Hoef, Jeffrey Moore, Nicholas Tregenza, Jay Barlow, Tim Gerrodette, Len Thomas, Barbara Taylor
2017
Seals and shipping Esther Lane Jones, Gordon Drummond Hastie, Sophie Caroline Smout, Joseph Onoufriou, Nathan Merchant, Kate Brookes, David Thompson
2017
Spatio-temporal variation in click production rates of beaked whales Victoria E. Warren, Tiago A. Marques, Danielle Harris, Len Thomas, Peter Lloyd Tyack, Natacha Aguilar de Soto, Mark Johnson
2017
The number and distribution of polar bears in the western Barents Sea Jon Aars, Tiago A. Marques, Karen Lone, Magnus Andersen, Øystein Wiig, Ida Marie Bardalen Fløystad, Snorre B. Hagen, Stephen Terrence Buckland

Underwater ambient noise in a baleen whale migratory habitat off the Azores Miriam Romagosa, Irma Cascão, Nathan D. Merchant, Marc O. Lammers, Eva Giacomello, Tiago A. Marques, Mónica A. Silva
2017
A new insight for monitoring ungulates Ana M. Valente, Tiago A. Marques, Carlos Fonseca, Rita Tinoco Torres
2016
Discrimination of fast click series produced by tagged Risso’s dolphins (Grampus griseus) for echolocation or communication Patricia Arranz Alonso, Stacy Lynn De Ruiter, Alison Stimpert, Ari Friedlaender, Jeremy Goldbogen, Fleur Visser, John Calambokidis, Brandon Southall, Peter Lloyd Tyack
2016
Echolocation detections and digital video surveys provide reliable estimates of the relative density of harbour porpoises Laura D. Williamson, Kate L. Brookes, Beth E. Scott, Isla M. Graham, Gareth Bradbury, Philip Steven Hammond, Paul M. Thompson
2016
Harbour Seal Decline - vital rates and drivers Monica Arso Civil, Sophie Caroline Smout, Callan David Duck, Chris Morris, Joseph Onoufriou, David Thompson, Andrew Brownlow, Nicholas Davison, Caroline Cummings, Patrick Pomeroy, Bernie J McConnell, Ailsa Jane Hall
2016
Purse-seine vessels as platforms for monitoring the population status of dolphin species in the eastern tropical Pacific Ocean Cleridy E. Lennert-Cody, Mark N. Maunder, Paul C. Fiedler, Mihoko Minami, Tim Gerrodette, Jeremy Rusin, Carolina V. Minte-Vera, Michael Scott, Stephen Terrence Buckland
2016
Quantifying turnover in biodiversity of British breeding birds Phil Harrison, Joyce Yuan , Stephen Terrence Buckland, Cornelia Sabrina Oedekoven, David Andrew Elston, Mark Brewer, Alison Johnston, James Pierce-Higgins
2016
Searching for trends in river dolphin abundance Jeffrey E. Moore, Catalina Gomez-Salazar, Fernando Trujillo, M Louise Burt
2016
Using species proportions to quantify turnover in biodiversity Joyce Yuan , Stephen Terrence Buckland, Phil Harrison, Sergey Foss, Alison Johnston
2016
A general framework for animal density estimation from acoustic detections across a fixed microphone array Ben Stevenson, David Louis Borchers, R. Altwegg, Douglas Michael Gillespie, G.J. Measey
2015
Beyond climate envelopes Debbie JF Russell, Sarah Wanless, Yvonne Collingham, Barbara Anderson, Colin Beale, James Reid, Brian Huntley, Keith Hamer
2015
Developing and enhancing biodiversity monitoring programmes Michael J. O. Pocock, Stuart E. Newson, Ian G. Henderson, Jodey Peyton, William J. Sutherland, David G. Noble, Stuart G. Ball, Björn C. Beckmann, Jeremy Biggs, Tom Brereton, David J. Bullock, Stephen Terrence Buckland, Mike Edwards, Mark A. Eaton, Martin C. Harvey, Mark O. Hill, Martin Horlock, David S. Hubble, Angela M. Julian, Edward C. Mackey, Darren J. Mann, Matthew J. Marshall, Jolyon M. Medlock, Elaine M. O'Mahony, Marina Pacheco, Keith Porter, Steve Prentice, Deborah A. Procter, Helen E. Roy, Sue E. Southway, Chris R. Shortall, Alan J. A. Stewart, David E. Wembridge, Mark A. Wright, David B. Roy
2015
Estimating red deer abundance using the pellet-based distance sampling method R. T. Torres, Ana M. Valente, Tiago A. Marques, C. Fonseca
2015
From species to communities Amy Elizabeth Deacon, Hideyasu Shimadzu, Maria Dornelas, Indar W. Ramnarine, Anne Magurran
2015
Harbour seal haul-out monitoring, Sound of Islay. Scottish Natural Heritage Commissioned Report No. 894. William Paterson, Debbie JF Russell, Mick Wu, Bernie J McConnell, David Thompson
2015
Mitigation of vessel-strike mortality of endangered Bryde's whales in the Hauraki Gulf, New Zealand Rochelle Constantine, Mark Johnson, Leena Riekkola, Stephanie Jervis, Lily Kozmian-Ledward, Todd Dennis, Leigh G. Torres, Natacha Aguilar de Soto
2015
Passive acoustic monitoring of beaked whale densities in the Gulf of Mexico John Hildebrand, Simone Baumann-Pickering, Kaitlin Frasier, Jennifer Trickey, Karlina Merkens, Sean Wiggins, Mark McDonald, Lance Garrison, Danielle Harris, Tiago A. Marques, Len Thomas
2015
Predicting the effects of human developments on individual dolphins to understand potential long-term population consequences Enrico Pirotta, John Harwood, Paul Thompson, Leslie New, Barbara Cheney, Monica Arso Civil, Philip Steven Hammond, Carl Robert Donovan, David Lusseau
2015
Rapid biotic homogenization of marine fish assemblages Anne Magurran, Maria Dornelas, Faye Helen Moyes, Nicholas J Gotelli, Brian McGill
2015
Assemblage time series reveal biodiversity change but not systematic loss Maria Dornelas, Nicholas J Gotelli, Brian McGill, Hideyasu Shimadzu, Faye Helen Moyes, Anne Magurran
2014
New density estimates of a threatened sifaka species (Propithecus coquereli) in Ankarafantsika National Park Célia Kun-Rodrigues, Jordi Salmona, Aubin Besolo, Emmanuel Rasolondraibe, Clément Rabarivola, Tiago A. Marques, Lounès Chikhi
2014
Occurrence, distribution and abundance of cetaceans in Onslow Bay, North Carolina, USA Andrew, J. Read, S. Barco, J. Bell, David Louis Borchers, M Louise Burt, E.W. Cummings, J. Dunn, J. Fougeres, L. Hazen, L.E. Williams-Hodge, A-M. Laura, R.J. McAlarney, P. Nilsson, D.A. Pabst, Charles G. M. Paxton, S.Z. Schneider, Kim Urian, D.M. Waples, W.A. McLellan
2014
The response of otters to environmental changes imposed by the construction of large dams Nuno M. Pedroso, Tiago A. Marques, Margarida Santos-Reis
2014
Towards collective circum-antarctic passive acoustic monitoring I. Van Opzeeland, F. Samaran, K.M. Stafford, K. Findlay, J. Gedamke, Danielle Harris, B.S. Miller
2014
Cetacean abundance and distribution in European Atlantic shelf waters to inform conservation and management Philip Steven Hammond, Kelly Macleod, Per Berggren, David Louis Borchers, M Louise Burt, Ana Cañadas, Genevieve Desportes, Greg P Donovan, Anita Gilles, Douglas Michael Gillespie, Jonathan Charles David Gordon, Lex Hiby, Iwona Kuklik, Russell Leaper, Kristina Lehnert, Mardik Leopold, Philip Lovell, Nils Øien, Charles G. M. Paxton, Vincent Ridoux, Emer Rogan, Filipa Isabel Pereira Samarra, Meike Scheidat, Marina Sequeira, Ursula Siebert, Henrik Skov, Mark Tasker, Jonas Teilmann, Olivier Van Canneyt, José Antonio Vázquez
2013
Ecosystem-based management objectives for the North Sea mark Dickey-Collas, Georg Engelhard, Anna RIndorf, Kristina Raab, Sophie Caroline Smout, Geert Aarts, Martin van Deurs, Thomas Brunel, Ayoe Hoff, Rebecca Lauerberg, Stefan Garthe, Ken Haste Anderson, F Scott, T van Kooten, Douglas Beare, Myron Peck
2013
Using hierarchical bayes to understand movement, health, and survival in the endangered North Atlantic right whale Robert Schilling Schick, Scott D. Kraus, Rosalind M. Rolland, Amy R. Knowlton, Philip K. Hamilton, Heather M. Pettis, Robert D. Kenney, James S. Clark
2013
Global analysis of cetacean line-transect surveys Len Thomas, Catriona M Harris, Kristin Kaschner, Philip Steven Hammond,
2012
Status assessment of the Critically Endangered Azores Bullfinch Pyrrhula murina Ricardo S. Ceia, Jaime A. Ramos, Ruben H. Heleno, Geoff M. Hilton, Tiago A. Marques
2011
Estimating bird abundance Stephen Terrence Buckland, Stuart J. Marsden, Rhys E. Green
2008