Publications (PURE)

Publications
31 (of 31 published available) for Centre for Research into Ecological & Environmental Modelling with keyword Aquaculture clear keyword filter. (source: University of St Andrews PURE)
Please click title of any item for full details

Effect of temporal and spatial resolution on identification of fishing activities in small-scale fisheries using pots and traps Tania Mendo, Sophie Caroline Smout, Tommaso Russo, Lorenzo D’Andrea, Mark Andrew James

Effective monitoring of freshwater fish Johannes Radinger, J. Robert Britton, Stephanie M. Carlson, Anne Magurran, Juan Diego Alcaraz-Hernández, Ana Almodóvar, Lluís Benejam, Carlos Fernández-Delgado, Graciela G. Nicola, Francisco J. Oliva-Paterna, Mar Torralva, Emili García-Berthou

Effects of impulsive noise on marine mammals Gordon Drummond Hastie, Nathan Merchant, Thomas Goetz, Debbie JF Russell, Paul Thompson, Vincent Janik

Population-level consequences of seismic surveys on fishes Hans Slabbekoorn, John Dalen, Dick de Haan, Hendrik V. Winter, Craig Radford, Michael A. Ainslie, Kevin D. Heaney, Tobias van Kooten, Len Thomas, John Harwood

A collaborative European approach to accelerating translational marine science Philip Brennecke, Maria Ferrante, Ian Alistair Johnston, David Smith
2018
AIS data to inform small scale fisheries management and marine spatial planning Mark Andrew James, Tania Mendo, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson
2018
BioTIME Maria Dornelas, Laura H. Antão, Faye Helen Moyes, Amanda E. Bates, Anne Magurran, Dušan Adam, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Arcos, Narayanan Ayyappan, Gal Badihi, Andrew H. Baird, Miguel Maria Borges Da Costa Guint Barbosa, Tiago Egydio Barreto, Claus Bässler, Alecia Bellgrove, Jonathan Belmaker, Lisandro Benedetti-cecchi, Brian J. Bett, Anne D. Bjorkman, Magdalena Błażewicz, Shane A. Blowes, Christopher P. Bloch, Timothy C. Bonebrake, Susan Boyd, Matt Bradford, Andrew J. Brooks, James H. Brown, Helge Bruelheide, Phaedra Budy, Fernando Carvalho, Edward Castañeda-moya, Chaolun Allen Chen, John F. Chamblee, Tory J. Chase, Laura Siegwart Collier, Sharon K. Collinge, Richard Condit, Elisabeth J. Cooper, J. Hans C. Cornelissen, Unai Cotano, Shannan Kyle Crow, Gabriella Damasceno, Claire H. Davies, Robert A. Davis, Frank P. Day, Steven Degraer, Tim S. Doherty, Timothy E. Dunn, Giselda Durigan, J. Emmett Duffy, Dor Edelist, Graham J. Edgar, Robin Elahi, Sarah C. Elmendorf, Anders Enemar, S. K. Morgan Ernest, Rubén Escribano, Marc Estiarte, Brian S. Evans, Tung-yung Fan, Fabiano Turini Farah, Luiz Loureiro Fernandes, Fábio Z. Farneda, Alessandra Fidelis, Robert Fitt, Anna Maria Fosaa, Geraldo Antonio Daher Correa Franco, Grace E. Frank, William R. Fraser, Hernando García, Roberto Cazzolla Gatti, Or Givan, Elizabeth Gorgone-barbosa, William A. Gould, Corinna Gries, Gary D. Grossman, Julio R. Gutierréz, Stephen Hale, Mark E. Harmon, John Harte, Gary Haskins, Donald L. Henshaw, Luise Hermanutz, Pamela Hidalgo, Pedro Higuchi, Andrew Hoey, Gert Van Hoey, Annika Hofgaard, Kristen Holeck, Robert D. Hollister, Richard Holmes, Mia Hoogenboom, Chih-hao Hsieh, Stephen P. Hubbell, Falk Huettmann, Christine L. Huffard, Allen H. Hurlbert, Natália Macedo Ivanauskas, David Janík, Ute Jandt, Anna Jażdżewska, Tore Johannessen, Jill Johnstone, Julia Jones, Jungwon Kang, Tasrif Kartawijaya, Erin C. Keeley, Douglas A. Kelt, Rebecca Jane Kinnear, Kari Klanderud, Halvor Knutsen, Christopher C. Koenig, Alessandra R. Kortz, Kamil Král, Linda A. Kuhnz, Chao-yang Kuo, David J. Kushner, Claire Laguionie-marchais, Lesley T. Lancaster, Cheol Min Lee, Jonathan S. Lefcheck, Esther Lévesque, David Lightfoot, Francisco Lloret, John D. Lloyd, Adrià López-baucells, Maite Louzao, Joshua S. Madin, Borgþór Magnússon, Shahar Malamud, Iain McCombe Matthews, Kent P. Mcfarland, Brian Mcgill, Diane Mcknight, William O. Mclarney, Jason Meador, Peter L. Meserve, Daniel J. Metcalfe, Christoph F. J. Meyer, Anders Michelsen, Nataliya Milchakova, Tom Moens, Even Moland, Jon Moore, Carolina Mathias Moreira, Jörg Müller, Grace Murphy, Isla H. Myers-smith, Randall W. Myster, Andrew Naumov, Francis Neat, James A. Nelson, Michael Paul Nelson, Stephen F. Newton, Natalia Norden, Jeffrey C. Oliver, Esben M. Olsen, Vladimir G. Onipchenko, Krzysztof Pabis, Robert J. Pabst, Alain Paquette, Sinta Pardede, David Maxwell Paterson, Raphaël Pélissier, Josep Peñuelas, Alejandro Pérez-matus, Oscar Pizarro, Francesco Pomati, Eric Post, Herbert H. T. Prins, John C. Priscu, Pieter Provoost, Kathleen L. Prudic, Erkki Pulliainen, B. R. Ramesh, Andrew Rassweiler, Jose Eduardo Rebelo, Daniel C. Reed, Peter B. Reich, Suzanne M. Remillard, Anthony J. Richardson, J. Paul Richardson, Itai Van Rijn, Ricardo Rocha, Victor H. Rivera-monroy, Christian Rixen, Kevin P. Robinson, Ricardo Ribeiro Rodrigues, Denise De Cerqueira Rossa-feres, Lars Rudstam, Henry Ruhl, Catalina S. Ruz, Erica M. Sampaio, Nancy Rybicki, Andrew Rypel, Sofia Sal, Beatriz Salgado, Flavio A. M. Santos, Ana Paula Savassi-coutinho, Sara Scanga, Jochen Schmidt, Robert Schooley, Fakhrizal Setiawan, Kwang-tsao Shao, Gaius R. Shaver, Sally Sherman, Thomas W. Sherry, Jacek Siciński, Ana Carolina Da Silva, Fernando Rodrigues Da Silva, Fabio L. Silveira, Jasper Slingsby, Tracey Smart, Sara J. Snell, Nadejda A. Soudzilovskaia, Gabriel B. G. Souza, Flaviana Maluf Souza, Vinícius Castro Souza, Christopher D. Stallings, Rowan Stanforth, Emily H. Stanley, José Mauro Sterza, Maarten Stevens, Rick Stuart-smith, Yzel Rondon Suarez, Sarah Supp, Jorge Yoshio Tamashiro, Sukmaraharja Tarigan, Gary P. Thiede, Simon Thorn, Anne Tolvanen, Maria Teresa Zugliani Toniato, Ørjan Totland, Robert R. Twilley, Gediminas Vaitkus, Nelson Valdivia, Martha Isabel Vallejo, Thomas J. Valone, Carl Van Colen, Jan Vanaverbeke, Fabio Venturoli, Hans M. Verheye, Marcelo Vianna, Rui P. Vieira, Tomáš Vrška, Con Quang Vu, Lien Van Vu, Robert B. Waide, Conor Waldock, Dave Watts, Sara Webb, Tomasz Wesołowski, Ethan P. White, Claire E. Widdicombe, Dustin Wilgers, Richard Williams, Stefan B. Williams, Mark Williamson, Michael R. Willig, Trevor J. Willis, Sonja Wipf, Kerry D. Woods, Eric J. Woehler, Michael L. Zettler
2018
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond
2018
Genomic tools and selective breeding in molluscs Christopher Michael Hollenbeck, Ian Alistair Johnston
2018
Turbulent flow reduces oxygen consumption in the labriform swimming shiner perch, Cymatogaster aggregata Julie M. van der Hoop, Margaret L. Byron, Karlina Ozolina, David Lawrence Miller, Jacob L. Johansen, Paolo Domenici, John F. Steffensen
2018
A workflow used to design low density SNP panels for parentage assignment and traceability in aquaculture species and its validation in Atlantic salmon Daniel Garcia de la Serrana Castillo, Aubrie Onoufriou, Borghild Hillestad, Ian Alistair Johnston
2017
Addressing uncertainty in marine resource management; combining community engagement and tracking technology to characterize human behavior Kristian Metcalfe, Tim Collins, Kirsten E. Abernethy, Richard Boumba, Jean-Claude Dengui, Ricky Miyalou, Richard J. Parnell, Kate E. Plummer, Debbie JF Russell, Gilbert Koumba Safou, Dominic Tilley, Rachel A. Turner, Hilde Vanleeuwe, Matthew J. Witt, Brendan J. Godley
2017
Animal Counting Toolkit Katie Gaut, Rowenna Gryba, Jeffrey Moore, Eric Rexstad, Doug Sandilands, Justin Steventon, Randall Reeves
2017
Evaluating detectability of freshwater fish assemblages in tropical streams Amy Elizabeth Deacon, Rajindra Mahabir, Devan Inderlall, Indar W. Ramnarine, Anne Magurran
2017
Extinction is imminent for Mexico’s endemic porpoise unless fishery bycatch is eliminated Barbara L Taylor, Lorenzo Rojas-Bracho, Jeffrey Moore, Armando Jaramillo-Legorreta, Jay M Ver Hoef, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Jay Barlow, Tim Gerrodette, Nicholas Tregenza, Len Thomas, Philip Steven Hammond
2017
Seals and shipping Esther Lane Jones, Gordon Drummond Hastie, Sophie Caroline Smout, Joseph Onoufriou, Nathan Merchant, Kate Brookes, David Thompson
2017
Comparison of the transcriptional responses of skeletal muscle and bone to a flooding dose of leucine in the gilthead sea bream (Sparus aurata) Daniel Garcia de la Serrana Castillo, Edson A. Mareco, Vera LA Vieira, Deborah M. Power, Ian Alistair Johnston
2016
From physiology to policy Natacha Aguilar de Soto, Sascha Kate Hooker, Saana Isojunno, Mark Johnson, Patrick Miller, Peter Lloyd Tyack, Paul Wensveen, Carl Robert Donovan, Catriona M Harris, Danielle Harris, Laura Helen Marshall, Cornelia Sabrina Oedekoven, Rocio Prieto, Len Thomas
2016
Harbour Seal Decline - vital rates and drivers Monica Arso Civil, Sophie Caroline Smout, Callan David Duck, Chris Morris, Joseph Onoufriou, David Thompson, Andrew Brownlow, Nicholas Davison, Caroline Cummings, Patrick Pomeroy, Bernie J McConnell, Ailsa Jane Hall
2016
Purse-seine vessels as platforms for monitoring the population status of dolphin species in the eastern tropical Pacific Ocean Cleridy E. Lennert-Cody, Mark N. Maunder, Paul C. Fiedler, Mihoko Minami, Tim Gerrodette, Jeremy Rusin, Carolina V. Minte-Vera, Michael Scott, Stephen Terrence Buckland
2016
Using hierarchical centering to facilitate a reversible jump MCMC algorithm for random effects models Cornelia Sabrina Oedekoven, R. King , Stephen Terrence Buckland, Monique Lea MacKenzie, K. O. Evans, L. W Burger Jr.
2016
Characterization of the transcriptome of fast and slow muscle myotomal fibres in the pacu (Piaractus mesopotamicus) E.A. Mareco, Daniel Garcia de la Serrana Castillo, Ian Alistair Johnston, M. Dal-Pai-Silva
2015
RNAseq analysis of fast skeletal muscle in restriction-fed transgenic coho salmon (Oncorhynchus kisutch) Daniel Garcia de la Serrana Castillo, Robert Devlin, Ian Alistair Johnston
2015
Characterisation and expression of calpain family members in relation to nutritional status, diet composition and flesh texture in gilthead sea bream (Sparus aurata) Cristina Salmeron, Daniel Garcia de la Serrana Castillo, Vanesa Jimenez-Amilburu, Ramon Fontanillas, Isabel Navarro, Ian Alistair Johnston, Joaquim Gutierrez, Encarnacion Capilla
2013
Universal scaling rules predict evolutionary patterns of myogenesis in species with indeterminate growth Ian Alistair Johnston, Bjarni K. Kristjansson, Charles G. M. Paxton, Vera Lucia Almeida Vieira-Johnston, Daniel John MacQueen, Michael A. Bell
2012