Publications (PURE)

Publications
200 (of 1082 /dk/atira/pure/researchoutput/status/published available) for Centre for Research into Ecological & Environmental Modelling (source: University of St Andrews PURE)
Please click title of any item for full details

Aeromonas spp. prevalence, virulence and antimicrobial resistance in an ex situ program for threatened freshwater fish – a pilot study with protective measures Miguel L. Grilo, Guadalupe Amaro, Lélia Chambel, Carolina S. Marques, Tiago A. Marques, Fátima Gil, Carlos Sousa-Santos, Joana I. Robalo, Manuela Oliveira
Animals 2022 vol. 12
A fine-scale marine mammal movement model for assessing long-term aggregate noise exposure Ruth Joy, Robert Schilling Schick, Michael Dowd, Tetyana Margolina, John E. Joseph, Len Thomas
Ecological Modelling 2022 vol. 464
A novel approach to using seabed geomorphology as a predictor of habitat use in highly mobile marine predators Hannah Wyles, Lars Boehme, Debbie JF Russell, Matt Carter
Frontiers in Marine Science 2022
A wastewater-based epidemiology tool for COVID-19 surveillance in Portugal Sílvia Monteiro, Daniela Rente, Mónica V. Cunha, Manuel Carmo Gomes, Tiago A. Marques, Artur B. Lourenço, Eugénia Cardoso, Pedro Álvaro, Marco Silva, Norberta Coelho, João Vilaça, Fátima Meireles, Nuno Brôco, Marta Carvalho, Ricardo Santos
Science of the Total Environment 2022 vol. 804
Automated call detection for acoustic surveys with structured calls of varying length Juan Ye, David Louis Borchers
Methods in Ecology and Evolution 2022 vol. 13 pp. 1552-1567
Breeding behavior Kelly Robinson, Patrick Pomeroy
2022 pp. 229-279
Bringing bioinformatics to schools with the 4273pi project Stevie Bain, Heleen Plaisier, Felicity Anderson, Nicola Cook, Kathryn Crouch, Thomas Robert Meagher, Michael Gordon Ritchie, Edward Wallace, Daniel Barker
PLoS Computational Biology 2022 vol. 18
Channel crossings and lifesaving Charles G. M. Paxton
Mariner's Mirror 2022 vol. 108 pp. 93-100
Corrigendum Pedro M. Félix, Ana Pombo, Francisco Azevedo e. Silva, Tomás Simões, Tiago A. Marques, Ricardo Melo, Cristina Rocha, João Sousa, Eliana Venâncio, José L. Costa, Ana C. Brito
Frontiers in Marine Science 2022 vol. 9
Creating a monster Charles G. M. Paxton
Skeptical Inquirer 2022 vol. 46 pp. 46-48
Discrimination and surveillance of infectious severe acute respiratory syndrome Coronavirus 2 in wastewater using cell culture and RT-qPCR Silvia Monteiro, Daniela Rente, Mónica V Cunha, Tiago A. Marques, Eugénia Cardoso, João Vilaça, Norberta Coelho, Nuno Brôco, Marta Carvalho, Ricardo Santos
Science of the Total Environment 2022 vol. 815
Environmental drivers of population-level variation in the migratory and diving ontogeny of an Arctic top predator James Grecian, Garry B. Stenson, Martin Biuw, Lars Boehme, Lars P. Folkow, Pierre J. Goulet, Ian D. Jonsen, Aleksander Malde, Erling S. Nordøy, Aqqalu Rosing-Asvid, Sophie Caroline Smout
Royal Society Open Science 2022 vol. 9
Estimating Florida manatee (Trichechus manatus latirostris) abundance using passive acoustic methods Athena M. Rycyk, Cora Berchem, Tiago A. Marques
JASA Express Letters 2022 vol. 2
Estimating the abundance of the critically endangered Baltic Proper harbour porpoise (Phocoena phocoena) population using passive acoustic monitoring Mats Amundin, Julia Carlström, Len Thomas, Ida Carlén, Jonas Teilmann, Jakob Tougaard, Olli Loisa, Line A. Kyhn, Signe Sveegaard, M Louise Burt, Iwona Pawliczka, Radomil Koza, Bartlomiej Arciszewski, Anders Galatius, Jussi Laaksonlaita, Jamie Donald John MacAulay, Andrew J. Wright, Anja Gallus, Michael Dähne, Alejandro Acevedo-Gutiérrez, Harald Benke, Jens Koblitz, Nick Tregenza, Daniel Wennerberg, Katharina Brundiers, Monika Kosecka, Cinthia Tiberi Ljungqvist, Ivar Jussi, Martin Jabbusch, Sami Lyytinen, Aleksej Šaškov, Penina Blankett
Ecology and Evolution 2022 vol. 12
Estimating uncertainty in density surface models David Lawrence Miller, Elizabeth A. Becker, Karin A. Forney, Jason J. Roberts, Ana Maria Canadas, Robert Schilling Schick
PeerJ 2022 vol. 10
Evaluating suitability of saliva to measure steroid concentrations in grey seal pups Vaida Survilene, O Ruksenas, Patrick Pomeroy, Simon Moss, Kimberley Ann Bennett
General and Comparative Endocrinology 2022 vol. 326
Fishing gear entanglement threatens recovery of critically endangered North Atlantic right whales Amy R. Knowlton, James S. Clark, Philip K. Hamilton, Scott D. Kraus, Heather M. Pettis, Rosalind M. Rolland, Robert Schilling Schick
Conservation Science and Practice 2022 vol. 4
Global patterns in functional rarity of marine fish Faye Helen Moyes, Anne Magurran
Nature Communications 2022 vol. 13
Influence of offshore oil and gas structures on seascape ecological connectivity Dianne L. McLean, Luciana C. Ferreira, Jessica A. Benthuysen, Karen J. Miller, Marie-Lise Schlappy, Matthew J. Ajemian, Oliver Berry, Silvana N. R. Birchenough, Todd Bond, Fabio Boschetti, Ann S. Bull, Jeremy T. Claisse, Scott A. Condie, Pierpaolo Consoli, Joop W. P. Coolen, Michael Elliott, Irene Sarah Fortune, Ashley M. Fowler, Bronwyn M. Gillanders, Hugo B. Harrison, Kristen M. Hart, Lea-Anne Henry, Chad L. Hewitt, Karlo Hock, Kieran Hyder, Milton Love, Peter I. Macreadie, Robert J. Miller, William A. Montevecchi, Mary M. Nishimoto, Henry M. Page, David Paterson, Charitha B. Pattiaratchi, Gretta T. Pecl, Joanne S. Porter, David B. Reeves, Cynthia Riginos, Sally Rouse, Debbie JF Russell, Craig D. H. Sherman, Jonas Teilmann, Victoria L. G. Todd, Eric A. Treml, David H. Williamson, Michele Thums
Global Change Biology 2022 vol. 28 pp. 3515-3536
Interactions between air-breathing marine megafauna and artisanal fisheries in Southern Iberian Atlantic waters Sofia Alexandre, Ana Marçalo, Tiago A. Marques, Alexandra Pires, Mafalda Rangel, Adriana Ressurreição, Pedro Monteiro, Karim Erzini, Jorge MS Gonçalves
Fisheries Research 2022 vol. 254
Investigating local population dynamics of bottlenose dolphins in the northern Bahamas and the impact of hurricanes on survival Jennifer Coxon, Monica Arso Civil, Charlotte Dunn, Philip Steven Hammond
Mammalian Biology 2022 vol. Online First
Is a little enough? Paucity of immune proteins in serum of precocial neonates of a marine carnivoran—the Atlantic Grey Seal Suzanne McGill, Richard Burchmore, Patrick Pomeroy, Malcolm Kennedy
Frontiers in Ecology and Evolution 2022 vol. 9
Mirror image serum lipid carrier protein profiles in pup and lactating mother Atlantic grey seals reflect contrasting resource mobilisation challenges Suzanne McGill, Richard Burchmore, Patrick Pomeroy, Malcolm Kennedy
Frontiers in Marine Science 2022 vol. 9
Modeling population effects of the Deepwater Horizon oil spill on a long-lived species Lori H. Schwacke, Tiago A. Marques, Len Thomas, Brian C. Balmer, Ashley Barratclough, Kathleen Colegrove, Sylvain De Guise, Lance P. Garrison, Forrest M. Gomez, Jeanine S. Morey, Keith D. Mullin, Brian M. Quigley, Patricia Rosel, Teresa K. Rowles, Ryan Takeshita, Forrest I. Townsend, Todd R. Speakman, Randall S. Wells, Eric S. Zolman, Cynthia R. Smith
Conservation Biology 2022 vol. 36
More vaquita porpoises survive than expected Lorenzo Rojas-Bracho, Barbara Taylor, Len Thomas, Armando Jaramillo-Legorreta, Edwyna Nieto-García, Gustavo Cárdenas Hinojosa, Jay Barlow, Sarah L. Mesnick, Tom Gerrodette, Paula Olson, Annette Henry, Henoch Rizo, Eva Hidalgo-Pla, Andrea Bonilla-Garzón
Endangered Species Research 2022 vol. 48 pp. 225-234
Multi-decadal environmental change in the Barents Sea recorded by seal teeth Camille de la Vega, Pearse J. Buchanan, Alessandro Tagliabue, Joanne E. Hopkins, Rachel M. Jeffreys, Anne Kirstine Frie, Martin Biuw, Joanna Louise Kershaw, James Grecian, Louisa Norman, Sophie Caroline Smout, Tore Haug, Claire Mahaffey
Global Change Biology 2022 vol. 28 pp. 3054-3065
Multi-species population indices for sets of species including rare, disappearing or newly occurring species Fränzi Korner-Nievergelt, Nicolas Strebel, Stephen Terrence Buckland, Robin Freeman, Richard D. Gregory, Jérôme Guélat, Nick Isaac, Louise Mc Rae, Tobias Roth, Saskia Schirmer, Leo L. Soldaat, Petr Voříšek, Thomas Sattler
Ecological Indicators 2022 vol. 140
Population abundance and density estimates for Costa Rica’s endemic sea snake, Hydrophis platurus xanthos Brooke L. Bessesen, Cornelia Sabrina Oedekoven, Gary J. Galbreath, Manuela González-Suárez
Frontiers in Marine Science 2022 vol. 9
Prey encounters and spatial memory influence use of foraging patches in a marine central place forager Virginia Iorio-Merlo, Isla Graham, Rebecca Hewitt, Geert Aarts, Enrico Pirotta, Gordon Drummond Hastie, Paul Thompson
Proceedings of the Royal Society B: Biological Sciences 2022 vol. 289
Pygmy blue whale movement, distribution and important areas in the Eastern Indian Ocean Michele Thums, Luciana Ferreira, Curt Jenner, Micheline Jenner, Danielle Harris, Andrew Davenport, Virginia Andrews-Goff, Mike Double, Luciana Möller, Catherine R.M. Attard, Kerstin Bilgmann, Paul Thomson, Robert McCauley
Global Ecology and Conservation 2022 vol. 35
Recovery of SARS-CoV-2 from large volumes of raw wastewater is enhanced with the inuvai R180 system Silvia Monteiro, Daniela Rente, Mónica V Cunha, Tiago A. Marques, Eugénia Cardoso, Pedro Álvaro, João Vilaça, Jorge Ribeiro, Marco Silva, Norberta Coelho, Nuno Brôco, Marta Carvalho, Ricardo Santos
Journal of Environmental Management 2022 vol. 304
Sympatric seals, satellite tracking and protected areas Matt Carter, Lars Boehme, Michelle A. Cronin, Callan David Duck, James Grecian, Gordon Drummond Hastie, Mark Jessopp, Jason Matthiopoulos, Bernie J McConnell, David Lawrence Miller, Chris Morris, Simon Moss, David Thompson, Paul M. Thompson, Debbie JF Russell
Frontiers in Marine Science 2022 vol. 9
The Loch Ness monster Charles G. M. Paxton
The Conversation 2022
Understanding the combined effects of multiple stressors Enrico Pirotta, Len Thomas, Daniel Costa, Ailsa Jane Hall, Catriona M Harris, John Harwood, Scott Kraus, Patrick James Miller, Michael Moore, Theoni Photopoulou, Rosalind Rolland, Lori Schwacke, Samantha Simmons, Brandon Southall, Peter Lloyd Tyack
Science of the Total Environment 2022 vol. 821
Variability in prey field structure drives inter-annual differences in prey encounter by a marine predator, the little penguin Lachlan R. Phillips, Gemma Carroll, Ian Jonsen, Robert Harcourt, Andrew Stuart Brierley, Adam Wilkins, Martin James Cox
Royal Society Open Science 2022 vol. 9
A comparison of three methods for estimating call densities of migrating bowhead whales using passive acoustic monitoring Cornelia Sabrina Oedekoven, Tiago A. Marques, Danielle Harris, Len Thomas, Aaron M. Thode, Susanna B. Blackwell, Alexander S. Conrad, Katherine H. Kim
Environmental and Ecological Statistics 2021
A guide to state–space modeling of ecological time series Marie Auger-Méthé, Ken Newman, Diana Cole, Fanny Empacher, Rowenna Gryba, Aaron A. King, Vianey Leos-Barajas, Joanna Mills Flemming, Anders Nielsen, Giovanni Petris, Len Thomas
Ecological Monographs 2021 vol. 91
A remote sensing approach to understanding patterns of secondary succession in tropical forest Eric Chraibi, Sandra Luque, Amy Elizabeth Deacon, Anne Magurran, Jean-Baptiste Féret
Remote Sensing 2021 vol. 13
Abundance estimates of three cetacean species in the coastal waters of Matang Perak, Peninsular Malaysia Sui Hyang Kuit, Louisa Shobhini Ponnampalam, Philip Steven Hammond, Ving Ching Chong, Amy Yee-Hui Then
Aquatic Conservation: Marine and Freshwater Ecosystems 2021 vol. 31 pp. 3120-3132
Accurate epigenetic aging in bottlenose dolphins (Tursiops truncatus), an essential step in the conservation of at-risk dolphins Ashley Barratclough, Cynthia R. Smith, Forrest M. Gomez, Theoni Photopoulou, Ryan Takeshita, Enrico Pirotta, Len Thomas, Abby M. McClain, Celeste Parry, Joseph A. Zoller, Steve Horvath, Lori H. Schwacke
Journal of Zoological and Botanical Gardens 2021 vol. 2 pp. 416-420
Aerial photogrammetry and tag-derived tissue density reveal patterns of lipid-store body condition of humpback whales on their feeding grounds Kagari Aoki, Saana Isojunno, Charlotte Bellot, takahashi Iwata, Joanna Louise Kershaw, Yu Akiyama, Lucía Martina Martín López, Christian Ramp, Martin Biuw, Paul Wensveen, Patrick Pomeroy, Tomoko Narazaki, Ailsa Jane Hall, Katsufumi Sato, Patrick James Miller
Proceedings of the Royal Society of London Series B: Biological Sciences 2021 vol. 288
AgentSeal Magda Ewa Chudzinska, Jacob Nabe-Nielsen, Sophie Caroline Smout, Sophie Brasseur, Isla Graham, Paul Thompson, Bernie J McConnell
Ecological Modelling 2021 vol. 440
Allo-suckling occurrence and its effect on lactation and nursing duration in harbour seals (Phoca vitulina) in Orkney, Scotland Monica Arso Civil, Emily Hague, Izzy Langley, Lindesay Alexandra Sarah Scott-Hayward
Behavioral Ecology and Sociobiology 2021 vol. 75
Allometric relationships to assess ontogenetic adaptative changes in three NE Atlantic commercial sea cucumbers (Echinodermata, Holothuroidea) F. Azevedo e Silva, A.C. Brito, T. Simões, A. Pombo, Tiago A. Marques, C. Rocha, J. Sousa, E. Venâncio, P.M. Félix
Aquatic Ecology 2021 vol. 55 pp. 711-720
Alternative method for assessment of southwestern Atlantic humpback whale population status Guilherme A. Bortolotto de Oliveira, Len Thomas, Philip Steven Hammond, Alexandre Zerbini
PLoS ONE 2021 vol. 16
An empirical demonstration of the effect of study design on density estimations Muhammad Ali Nawaz, Barkat Ullah Khan, Amer Mahmood, Muhammad Younas, Jaffar Ud Din, Chris Sutherland
Scientific Reports 2021 vol. 11
An external telemetry system for recording resting heart rate variability and heart rate in free-ranging large wild mammals Sean D. Twiss, Naomi Brannan, Courtney R. Shuert, Amanda M. Bishop, Patrick Pomeroy, Simon Moss
PLoS ONE 2021 vol. 16
An open access dataset for developing automated detectors of Antarctic baleen whale sounds and performance evaluation of two commonly used detectors Brian S. Miller, Naysa Balcazar, Sharon Nieukirk, Emmanuelle C. Leroy, Meghan Aulich, Fannie W. Shabangu, Robert P. Dziak, Won Sang Lee, Jong Kuk Hong, Kathleen M. Stafford, I. Van Opzeeland, Danielle Harris, F. Samaran, Ana Širović, Susannah Buchan, K. Findlay
Scientific Reports 2021 vol. 11
Assessing North Atlantic right whale health Michael J. Moore, Teresa K. Rowles, Deborah A. Fauquier, Jason D. Baker, Ingrid Biedron, John W. Durban, Philip K. Hamilton, Allison G. Henry, Amy R. Knowlton, William A. McLellan, Carolyn A. Miller, Richard M. Pace, Heather M. Pettis, Stephen Raverty, Rosalind M. Rolland, Robert Schilling Schick, Sarah M. Sharp, Cynthia R. Smith, Len Thomas, Julie M. van der Hoop, Michael H. Ziccardi
Diseases of Aquatic Organisms 2021 vol. 143 pp. 205-226
Assessing pinniped bycatch mortality with uncertainty in abundance and post-release mortality A. E. Punt, Maritza Sepúlveda, Margaret Siple, Jeff Rey Moore, Tessa B. Francis, Philip Steven Hammond, Dennis Heinemann, Kristy J. Long, Doris Oliva, Randall R. Reeves, Guðjón Már Sigurðsson, G. A. Víkingsson, Paul R. Wade, Rob Williams, Alexandre N. Zerbini
Fisheries Research 2021 vol. 235
Assessing population-level effects of anthropogenic disturbance on a marine mammal population Rebecca A Dunlop, Janelle Braithwaite, Lars O Mortensen, Catriona M Harris
Frontiers in Marine Science 2021 vol. 8
Assessing the role of sampling uncertainty when predicting behavioral responses of tagged cetaceans exposed to naval sonar Phil Bouchet, Catriona M Harris, Len Thomas
Frontiers in Marine Science 2021 vol. 8
Bayesian Network Analysis reveals resilience of the jellyfish Aurelia aurita to an Irish Sea regime shift Emily G. Mitchell, Margaret Isabel Wallace, V Anne Smith, Amanda A. Wiesenthal, Andrew Stuart Brierley
Scientific Reports 2021 vol. 11
Best practices for assessing and managing bycatch of marine mammals Paul R. Wade, Kristy J. Long, Tessa B. Francis, André E. Punt, Philip Steven Hammond, Dennis Heinemann, Jeffrey E. Moore, Randall R. Reeves, Maritza Sepúlveda, Genoa Sullaway, Guðjón Már Sigurðsson, Margaret C. Siple, Gísli A. Víkingsson, Rob Williams, Alexandre N. Zerbini
Frontiers in Marine Science 2021 vol. 8
Biomarkers in ringed seals reveal recent onset of borealization in the high- compared to the mid-latitude Canadian Arctic Camille de la Vega, Claire Mahaffey, David J. Yurkowski, Louisa Norman, Elysia Simpson, Sophie Caroline Smout, Steven H. Ferguson, Rachel M. Jeffreys
Frontiers in Marine Science 2021 vol. 8
Biphasic growth modelling in elasmobranchs based on asymmetric and heavy-tailed errors J.E. Contreras-Reyes, R. Wiff, J. Soto, Carl Robert Donovan, M. Araya
Environmental Biology of Fishes 2021 vol. 104 pp. 615–628
COVID-19 Luzia Gonçalves, Maria Antónia Amaral Turkman, Carlos Geraldes, Tiago A. Marques, Lisete Sousa
Journal of Epidemiology and Global Health 2021 vol. 11 pp. 146 - 149
Calibrating models of cancer invasion Len Thomas, Mark Andrew Joseph Chaplain
Royal Society Open Science 2021 vol. 8
Changes in the movement and calling behavior of minke whales (Balaenoptera acutorostrata) in response to navy training Ian Noel Durbach, Catriona M Harris, Cameron Martin, Tyler A. Helble, E. Elizabeth Henderson, Glenn Ierley, Len Thomas, Stephen W. Martin
Frontiers in Marine Science 2021 vol. 8
Compound specific isotope analyses of harp seal teeth Joanna Louise Kershaw, Camille de la Vega, Rachel Jeffreys, AnneKristine Frie, Tore Haug, Claire Mahaffey, Colin Mettam, Garry Stenson, Sophie Caroline Smout
Marine Ecology Progress Series 2021 vol. 678 pp. 211-225
Context-dependent variability in the predicted daily energetic costs of disturbance for blue whales Enrico Pirotta, David E Cade, John Calambokidis, Daniel P Costa, James A Fahlbusch, Ari S Friedlaender, Jeremy A Goldbogen, John Harwood, Elliott L Hazen, Leslie New, Brandon L Southall
Conservation Physiology 2021 vol. 9
Contrasting trends in biodiversity of birds and trees during succession following cacao agroforest abandonment Amy Elizabeth Deacon, Dan Jaggernauth, Anne Magurran
Journal of Applied Ecology 2021 vol. 58 pp. 1248-1260
Correction to Mark V. Bravington, David Lawrence Miller, Sharon Louise Hedley
Journal of Agricultural, Biological, and Environmental Statistics 2021 vol. 26 pp. 324
DNA sonification for public engagement in bioinformatics Heleen Plaisier, Thomas Robert Meagher, Daniel Barker
BMC Research Notes 2021 vol. 14
Deep-diving beaked whales dive together but forage apart Jesús Alcázar-Treviño, Mark Johnson, Patricia Arranz, Victoria E. Warren, Carlos J. Pérez-González, Tiago A. Marques, Peter T. Madsen, Natacha Aguilar de Soto
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
Disentangling natural and anthropogenic forms of mortality and serious injury in a poorly studied pelagic dolphin Erin Ashe, Rob Williams, Alexandra Morton, Philip Steven Hammond
Frontiers in Marine Science 2021 vol. 8
Distribution and abundance of sei whales off the west coast of the Falkland Islands Caroline R. Weir, Maria Taylor, Pamela A. Q. Jelbes, Andrew Stanworth, Philip Steven Hammond
Marine Mammal Science 2021 vol. 37 pp. 919-933
Dolphin population specialized in foraging with artisanal fishers requires zero-bycatch management to persist Carolina Bezamat, Philip Steven Hammond, Pedro V. Castilho, Paulo C. Simões-Lopes, Fábio G. Daura-Jorge
Aquatic Conservation: Marine and Freshwater Ecosystems 2021 vol. 31 pp. 3133-3145
Driven mad by the sea serpent Charles G. M. Paxton
Mariner's Mirror 2021 vol. 107 pp. 308-323
Drivers of human-wildlife impact events involving mammals in Southeastern Brazil R. R. Hilário, W. D. Carvalho, C. Gheler-Costa, L. M.C. Rosalino, Tiago A. Marques, C. H. Adania, J. S. Paulino, P. M. Almeida, K. Mustin
Science of the Total Environment 2021 vol. 794
Ecosystem approach to harvesting in the Arctic Michael R. Heath, Déborah Benkort, Andrew Stuart Brierley, Ute Daewel, Jack H. Laverick, Roland Hudson Proud, Douglas C. Speirs
Ambio 2021 vol. First Online
Environmental cycles and individual variation in the vertical movements of a benthic elasmobranch Dmitry Alenynik, Jane Dodd, Janine Baerbel Illian, Mark Andrew James, Peter J. Wright, Sophie Caroline Smout, James A. Thorburn
Marine Biology 2021 vol. 168
Estimating acoustic cue rates in bowhead whales, Balaena mysticetus, during their fall migration through the Alaskan Beaufort Sea Susanna B. Blackwell, Aaron M. Thode, Alexander S. Conrad, Megan C. Ferguson, Catherine L. Berchok, Kathleen M. Stafford, Tiago A. Marques, Katherine H. Kim
Journal of the Acoustical Society of America 2021 vol. 149 pp. 3611-3625
Estimating bycatch mortality for marine mammals Jeffrey E. Moore, Dennis Heinemann, Tessa B. Francis, Philip Steven Hammond, Kristy J. Long, André E. Punt, Randall R. Reeves, Maritza Sepúlveda, Guðjón Már Sigurðsson, Margaret C. Siple, Gísli A. Víkingsson, Paul R. Wade, Rob Williams, Alexandre N. Zerbini
Frontiers in Marine Science 2021 vol. 8
Estimating the abundance of marine mammal populations Philip Steven Hammond, Tessa B. Francis, Dennis Heinemann, Kristy J. Long, Jeffrey E. Moore, André E. Punt, Randall R. Reeves, Maritza Sepúlveda, Guðjón Már Sigurðsson, Margaret C. Siple, Gísli Víkingsson, Paul R. Wade, Rob Williams, Alexandre N. Zerbini
Frontiers in Marine Science 2021 vol. 8
Evaluating strategies for managing anthropogenic mortality on marine mammals Mathieu Genu, Anita Gilles, Philip Steven Hammond, Kelly Macleod, Jade Paillé, Iosu Paradinas, Sophie Caroline Smout, Arliss J. Winship, Matthieu Authier
Frontiers in Marine Science 2021 vol. 8
Extending density surface models to include multiple and double-observer survey data David Lawrence Miller, David Fifield, Ewan Wakefield, Douglas B. Sigourney
PeerJ 2021 vol. 9
Fast, flexible alternatives to regular grid designs for spatial capture-recapture Ian Noel Durbach, David Louis Borchers, Chris Sutherland, Koustubh Sharma
Methods in Ecology and Evolution 2021 vol. 12 pp. 298-310
Food talk Miriam Romagosa, Sergi Pérez-Jorge, Irma Cascão, Helena Mouriño, Patrick Lehodey, Andreia Pereira, Tiago A. Marques, Luís Matias,
Proceedings. Biological sciences 2021 vol. 288
Gill transcriptomic responses to toxin-producing alga Prymnesium parvum in rainbow trout Morag Clinton, Elżbieta Król, Dagoberto Sepúlveda, Nikolaj R. Andersen, Andrew Stuart Brierley, David Ellard Keith Ferrier, Per Juel Hansen, Niels Lorenzen, Samuel A. M. Martin
Frontiers in Immunology 2021 vol. 12
Harbour porpoise (Phocoena phocoena) presence is reduced during tidal turbine operation Laura Eve Palmer, Douglas Michael Gillespie, Jamie Donald John MacAulay, Carol Elizabeth Sparling, Debbie JF Russell, Gordon Drummond Hastie
Aquatic Conservation: Marine and Freshwater Ecosystems 2021 vol. 31 pp. 3543-3553
Hidden Markov models identify major movement modes in accelerometer and magnetometer data from four albatross species Melinda G. Conners, Theo Michelot, Eleanor I. Heywood, Rachael A. Orben, Richard A. Phillips, Alexei L. Vyssotski, Scott A. Shaffer, Lesley H. Thorne
Movement Ecology 2021 vol. 9
High site-fidelity in common bottlenose dolphins despite low salinity exposure and associated indicators of compromised health Ryan Takeshita, Brian C. Balmer, Francesca Messina, Eric S. Zolman, Len Thomas, Randall S. Wells, Cynthia R. Smith, Teresa K. Rowles, Lori H. Schwacke, William David Halliday
PLoS ONE 2021 vol. 16
Impacts of jellyfish on marine cage aquaculture Morag Clinton, David Ellard Keith Ferrier, Samuel A M Martin, Andrew Stuart Brierley
ICES Journal of Marine Science 2021 vol. 78 pp. 1557–1573
Improved bathymetry leads to >4000 new seamount predictions in the global ocean – but beware of phantom seamounts! Chris Yesson, Tom B. Letessier, Alex Nimmo-Smith, Phil Hosegood, Andrew Stuart Brierley, Marie Hardouin, Roland Hudson Proud
UCL Open Environment 2021 vol. 4
Improving understanding of bottlenose dolphin movements along the east coast of Scotland. Final report. Monica Arso Civil, Sina Mews, Emily Hague, Barbara Cheney, Paul M Thompson, Philip Steven Hammond
2021
Integrating disparate datasets to model the functional response of a marine predator Philip Steven Hammond, Mradik Leopold, Signe Sveegaard, Sophie Caroline Smout
Ecology and Evolution 2021 vol. 11 pp. 17458-17470
Introducing a real-time interactive GUI tool for visualization of galaxy spectra Vivienne Wild, Adam Carnall, Michail Papathomas
Research Notes of the AAS 2021 vol. 5
Krill and salp faecal pellets contribute equally to the carbon flux at the Antarctic Peninsula Nora-Charlotte Pauli, Clara M. Flintrop, Christian Konrad, Evgeny A. Pakhomov, Steffen Swoboda, Florian Koch, Xin-Liang Wang, Ji-Chang Zhang, Andrew Stuart Brierley, Bettina Meyer, Morten H. Iversen
Nature Communications 2021 vol. 12
Latitudinal variation in arrival and breeding phenology of the pied flycatcher Ficedula hypoleuca using large-scale citizen science data P.G. Nicolau, M.D. Burgess, Tiago A. Marques, S.R. Baillie, N.J. Moran, D.I. Leech, Alison Johnston
Journal of Avian Biology 2021 vol. 52
Maintaining momentum for collaborative working groups in a post-pandemic world Diane S. Srivastava, Marten Winter, Louis J. Gross, Jean Paul Metzger, Jill S. Baron, Nicolas Mouquet, Thomas Robert Meagher, Benjamin S. Halpern, Valério D. Pillar
Nature Ecology and Evolution 2021 vol. 5 pp. 1188-1189
Marine mammal conservation Sarah E. Nelms, Joanna Alfaro-Shigueto, John P. Y. Arnould, Isabel C. Avila, Susan Bengtson Nash, Elizabeth Campbell, Matt Carter, Timothy Collins, Rohan J. C. Currey, Camila Domit, Valentina Franco-Trecu, Mariana M. P. B. Fuentes, Eric Gilman, Robert G. Harcourt, Ellen M. Hines, A. Rus Hoelzel, Sascha Kate Hooker, David W. Johnston, Nachiket Kelkar, Jeremy J. Kiszka, Kristin L. Laidre, Jeffrey C. Mangel, Helene Marsh, Sara M. Maxwell, Aubrie B. Onoufriou, Daniel M. Palacios, Graham J. Pierce, Louisa S. Ponnampalam, Lindsay Porter, Debbie JF Russell, Karen A. Stockin, Dipani Sutaria, Nina Wambiji, Caroline R. Weir, Ben Wilson, Brendon J. Godley
Endangered Species Research 2021 vol. 44 pp. 291-325
Mercury biomagnification in a Southern Ocean food web Sara Aparício, Andrew Stuart Brierley, Paco Bustamante, Filipe R. Ceia, João P. Coelho, Richard A. Philips, Sophie Fielding, Susan Gregory, Ricardo Matias, Miguel A. Pardal, Eduarda Pereira, Gabriele Stowasser, Geraint A. Tarling, José C. Xavier
Environmental Pollution 2021 vol. 275
Mesocarnivore community structuring in the presence of Africa's apex predator Gonçalo Curveira-Santos, Chris Sutherland, Simone Tenan, Albert Fernández-Chacón, Gareth K. H. Mann, Ross T. Pitman, Lourens H. Swanepoel
Proceedings of the Royal Society B: Biological Sciences 2021 vol. 288
Minding the data-gap trap Erin Ashe, Rob Williams, Christopher Clark, Christine Erbe, Leah R. Gerber, Ailsa Jane Hall, Philip Steven Hammond, Robert C. Lacy, Randall Reeves, Nicole L. Vollmer
Frontiers in Marine Science 2021 vol. 8
Modeling recruitment of birth cohorts to the breeding population Hannah Worthington, Ruth King, Rachel McCrea, Sophie Caroline Smout, Patrick Pomeroy
Frontiers in Ecology and Evolution 2021 vol. 9
Modelling the distribution of a commercial NE-Atlantic sea cucumber, Holothuria mammata Pedro M. Félix, Ana Pombo, Francisco Azevedo e Silva, Tomás Simões, Tiago A. Marques, Ricardo Melo, Cristina Rocha, João Sousa, Eliana Venâncio, José L. Costa, Ana C. Brito
Frontiers in Marine Science 2021 vol. 8
Molecular epidemiology, virulence traits and antimicrobial resistance signatures of Aeromonas spp. in the critically endangered Iberochondrostoma lusitanicum follow geographical and seasonal patterns Miguel L. Grilo, Sara Isidoro, Lélia Chambel, Carolina S. Marques, Tiago A. Marques, Carla Sousa-Santos, Joana I. Robalo, Manuela Oliveira
Antibiotics 2021 vol. 10
Ocean warming threatens southern right whale population recovery Macarena Agrelo, Fábio G Daura-Jorge, Victoria J Rowntree, Mariano Sironi, Philip Steven Hammond, Simon N Ingram, Carina F Marón, Florencia O Vilches, Jon Seger, Roger Payne, Paulo C Simões-Lopes
Science Advances 2021 vol. 7
On how statistics is used and abused to find truth in science Tiago A. Marques
Kairos. Journal of Philosophy & Science 2021 vol. 24 pp. 91-104
Oxidative stress, metabolic activity and mercury concentrations in Antarctic krill Euphausia superba and myctophid fish of the Southern Ocean Rosa Freitas, José C. Xavier, Paco Bustamante, João P. Coelho, Francesca Coppola, Ângela Almeida, Sophie Fielding, Miguel A. Pardal, Gabriele Stowasser, Giulia Pompeo, Geraint A. Tarling, Andrew Stuart Brierley, Eduarda Pereira
Marine Pollution Bulletin 2021 vol. 166
Parameter redundancy and the existence of maximum likelihood estimates in log-linear models Michail Papathomas, Ruth King
Statistica Sinica 2021 vol. 31 pp. 1125-1143
Patterns and drivers of rodent abundance across a South African multi-use landscape Beatriz C. Afonso, Lourens H. Swanepoel, Beatriz P. Rosa, Tiago A. Marques, Luís M. Rosalino, Margarida Santos-Reis, Gonçalo Curveira-Santos
Animals 2021 vol. 11
Quantifying the effects of tidal turbine array operations on the distribution of marine mammals Joseph Alistair Ross Onoufriou, Debbie JF Russell, David Thompson, Simon Moss, Gordon Drummond Hastie
Renewable Energy 2021 vol. 180 pp. 157-165
Report of the NAMMCO-ICES Workshop on Seal Modelling (WKSEALS 2020) Sophie Caroline Smout, Kimberly Murray, Geert Aarts, Martin Biuw, Sophie Brasseur, Alejandro Buren, Fanny Empacher, Anne Kirstine Frie, James Grecian, Mike Hammill, Bjarni Mikkelsen, Arnaud Mosnier, Aqqalu Rosing-asvid, Debbie JF Russell, Hans Skaug, Garry Stenson, Len Thomas, Jay Ver Hoef, Lars Witting, Vladimir Zabavnikov, Tor Arne Øigård, Ruth Fernandez, Fern Wickson
NAMMCO Scientific Publications 2021 vol. 12
Sampling the fish gill microbiome Morag Clinton, Samuel A. M. Martin, Andrew Stuart Brierley, David Ellard Keith Ferrier
BMC Microbiology 2021 vol. 21
Spatial variation in population-density of snow leopards in a multiple use landscape in Spiti Valley, Trans-Himalaya Rishi Kumar Sharma, Koustubh Sharma, David Louis Borchers, Yash Veer Bhatnagar, Kulbhushansingh R. Suryawanshi, Charudutt Mishra
PLoS ONE 2021 vol. 16
Sympatric threatened Iberian leuciscids exhibit differences in Aeromonas diversity and skin lesions’ prevalence Miguel L. Grilo, Lélia Chambel, Tiago A. Marques, Carla Sousa-Santos, Joana I. Robalo, Manuela Oliveira
PLoS ONE 2021 vol. 16
Taxonomic revision of the South Asian River dolphins (Platanista) Gillian Tracey Braulik, Frederick Archer, Uzma Khan, Mohammed Imran, Ravindra Kumar Sinha, Thomas A. Jefferson, Carl Robert Donovan, Jefferson Alden Graves
Marine Mammal Science 2021 vol. 37 pp. 1022-1059
The Simrad EK60 echosounder dataset from the Malaspina circumnavigation Xabier Irigoien, Thor Klevjer, Udane Martinez, Guillermo Boyra, Anders Røstad, Astrid C Wittmann, Carlos M Duarte, Stein Kaartvedt, Andrew Stuart Brierley, Roland Hudson Proud
Scientific Data 2021 vol. 8
The role of multidimensional poverty in antibiotic misuse Dominique LaShari Green, Katherine Lisa Keenan, Sarah Insia Huque, Mike Kesby, Martha F. Mushi, Catherine Kansiime, Benon Asiimwe, John Kiiru, Stephen Mshana, Stella Neema, Joseph R. Mwanga, Andy Lynch, Hannah Worthington, Emmanuel Olawale Olamijuwon, Mary Abed Al Ahad, Annette Aduda, Blandina T. Mmbaga, Joel Bazira, Alison Fiona Sandeman, John Stelling, Stephen Henry Gillespie, Gibson Kibiki, Wilber Sabiti, Derek James Sloan, Matthew Holden, Hatua Consortium
SSRN Electronic Journal 2021
The shape of species abundance distributions across spatial scales Laura Ines Henriques Antao, Anne Magurran, Maria Dornelas
Frontiers in Ecology and Evolution 2021 vol. 9
The summer distribution, habitat associations and abundance of seabirds in the sub-polar frontal zone of the Northwest Atlantic Ewan D. Wakefield, David Lawrence Miller, Sarah L. Bond, Fabrice le Bouard, Paloma C. Carvalho, Paulo Catry, Ben J. Dilley, David A. Fifield, Carina Gjerdrum, Jacob González-Solís, Holly Hogan, Vladimir Laptikhovsky, Benjamin Merkel, Julie A. O. Miller, Peter I. Miller, Simon J. Pinder, Tânia Pipa, Peter M. Ryan, Laura A. Thompson, Paul M. Thompson, Jason Matthiopoulos
Progress in Oceanography 2021 vol. 198
Trends in cetacean research in the Eastern North Atlantic Bárbara Cartagena-Matos, Klervi Lugué, Paulo Fonseca, Tiago A. Marques, Rui Prieto, Filipe Alves
Mammal Review 2021 vol. 51 pp. 436-453
Using predicted patterns of 3D prey distribution to map king penguin foraging habitat Roland Hudson Proud, Camille Melanie Marie-Anne Le Guen, Richard Sherley, Akiko Kato, Yan-Ropert Coudert, Norman Ratcliffe, Simon Jarman, Adam Wyness, John P. Arnould, Ryan A. Saunders, Paul G. Fernandes, Lars Boehme, Andrew Stuart Brierley
Frontiers in Marine Science 2021 vol. 8
Using sound to understand protein sequence data Edward Martin, Thomas Robert Meagher, Daniel Barker
BMC Bioinformatics 2021 vol. 22
What’s biodiversity got to do with it? Perceptions of biodiversity and restorativeness in urban parks P. Gonçalves, F. Grilo, R.C. Mendes, K. Vierikko, B. Elands, Tiago A. Marques, M. Santos-Reis
Ecology and Society 2021 vol. 26
A decision framework to identify populations that are most vulnerable to the population level effects of disturbance John Harwood, Ruth Joy, Catriona M Harris
Conservation Science and Practice 2020 vol. 2
Accounting for detection unveils the intricacy of wild boar and rabbit co-occurrence patterns in a Mediterranean landscape Ana Luísa Barros, Gonçalo Curveira-Santos, Tiago A. Marques, Margarida Santos-Reis
Scientific Reports 2020 vol. 10
An analysis of the risk of collisions between aircraft and vultures in Namibia Morgan Hauptfleisch, Nicki Knox, P Heita, O. Aschenborn, Monique Lea MacKenzie
Namibian Journal of Environment 2020 vol. 4 pp. 41-49
Are in vitro and in silico approaches used appropriately for animal-based major depressive disorder research? Constança Carvalho, Susana A. M. Varela, Tiago A. Marques, Andrew Knight, Luís Vicente
PLoS ONE 2020 vol. 15
Author Correction Miriam Romagosa, Mark Baumgartner, Irma Cascão, Marc O. Lammers, Tiago A. Marques, R.S. Santos,
Scientific Reports 2020 vol. 10
Automated classification of schools of the silver cyprinid Rastrineobola argentea in Lake Victoria acoustic survey data using random forests Roland Hudson Proud, Robert J. Kayanda, Martin J. Cox, Chrisphine Nyamweya, Vianny Natugonza, Inigo Everson, Mboni Elison, Laura Hobbs, Benedicto Boniphace Kashindye, Enock W. Mlaponi, Anthony Taabu-Munyaho, Venny M. Mwainge, Esther Kagoya, Antonio Pegado, Evarist Nduwayesu, Andrew Stuart Brierley
ICES Journal of Marine Science 2020 vol. 77 pp. 1379-1390
Baleen whale acoustic presence and behaviour at a Mid-Atlantic migratory habitat, the Azores Archipelago Miriam Romagosa, Mark Baumgartner, Irma Cascão, Marc O. Lammers, Tiago A. Marques, Ricardo S. Santos,
Scientific Reports 2020 vol. 10
Coping styles in capital breeders modulate behavioural trade-offs in time allocation courtney schuert, Patrick Pomeroy, sean twiss
Behavioral Ecology and Sociobiology 2020 vol. 74
Correction to David Lawrence Miller, Richard Glennie,
Journal of Agricultural, Biological, and Environmental Statistics 2020
Daniel S. Milo. Good Enough: The Tolerance for Mediocrity in Nature and Society Thomas Robert Meagher
Evolutionary Studies in Imaginative Culture 2020 vol. 4 pp. 183-186
Detections of whale vocalizations by simultaneously deployed bottom-moored and deep-water mobile autonomous hydrophones Selene Fregosi, Danielle Harris, Haruyoshi Matsumoto, David K. Mellinger, Jay Barlow, Simone Baumann-Pickering, Holger Klinck
Frontiers in Marine Science 2020 vol. 7
Discussion on Multiple-systems analysis for the quantification of modern slavery: classical and Bayesian approaches. By Silverman, B.W. Michail Papathomas, Ruth King
Journal of the Royal Statistical Society, Series A (General) 2020 vol. 183
Estimating the effects of pile driving sounds on seals Katherine Fae Whyte, Debbie JF Russell, Carol Elizabeth Sparling, Bas Binnerts, Gordon Drummond Hastie
Journal of the Acoustical Society of America 2020 vol. 147 pp. 3948-3958
Evaluating management strategies for marine mammal populations A. E. Punt, Margaret Siple, Guðjón Már Sigurðsson, G. A. Víkingsson, Tessa B. Francis, Sandra M. Granquist, Philip Steven Hammond, Dennis Heinemann, Kristy J. Long, Jeffrey E. Moore, Maritza Sepúlveda, Randall R. Reeves, Paul R. Wade, Rob Williams, Alexandre N. Zerbini
Canadian Journal of Fisheries and Aquatic Sciences 2020 vol. 77 pp. 1316-1331
Fin whale acoustic presence and song characteristics in seas to the southwest of Portugal Andreia Pereira, Danielle Harris, Peter Lloyd Tyack, Luis Matias
Journal of the Acoustical Society of America 2020 vol. 147 pp. 2235-2249
Fire and biodiversity in the Anthropocene Luke T Kelly, Katherine M Giljohann, Andrea Duane, Núria Aquilué, Sally Archibald, Enric Batllori, Andrew F Bennett, Stephen Terrence Buckland, Quim Canelles, Michael F Clarke, Marie-Josée Fortin, Virgilio Hermoso, Sergi Herrando, Robert E Keane, Frank K Lake, Michael A McCarthy, Alejandra Morán-Ordóñez, Catherine L Parr, Juli G Pausas, Trent D Penman, Adrián Regos, Libby Rumpff, Julianna L Santos, Annabel L Smith, Alexandra D Syphard, Morgan W Tingley, Lluís Brotons
Science 2020 vol. 370
First abundance estimate for white whales Delphinapterus leucas in Svalbard, Norway J Vacquié-garcia, C Lydersen, Tiago A. Marques, M Andersen, Km Kovacs
Endangered Species Research 2020 vol. 41 pp. 253-263
From pup to predator Matt Carter, Brett T McClintock, Clare B Embling, Kimberley A Bennett, David Thompson, Debbie JF Russell
Oikos 2020 vol. 129 pp. 630-642
Global change in the functional diversity of marine fisheries exploitation over the past 65 years Faye Helen Moyes, Anne Magurran
Proceedings of the Royal Society B: Biological Sciences 2020 vol. 287
Habitat partitioning in sympatric delphinids around the Falkland Islands Sophie Caroline Smout, Clint Blight, Lars Boehme, Grant Munro, Marina Costa, Sonja Heinrich
Frontiers in Marine Science 2020 vol. 7
Habitat-based predictions of at-sea distribution for grey and harbour seals in the British Isles Matt Carter, Lars Boehme, Callan David Duck, James Grecian, Gordon Drummond Hastie, Bernie J McConnell, David Lawrence Miller, Chris Morris, Simon Moss, David Thompson, Paul Thompson, Debbie JF Russell
2020
Harbour Seal Decline – vital rates and drivers Monica Arso Civil, Izzy Langley, Andy Law, Emily Hague, Eiren Kate Jacobson, Len Thomas, Sophie Caroline Smout, Rebecca Hewitt, Callan David Duck, Chris Morris, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Bernie J McConnell, Ailsa Jane Hall
2020
Landscape-scale forest loss as a catalyst of population and biodiversity change Gergana N. Daskalova, Isla H. Myers-Smith, Anne D. Bjorkman, Shane A. Blowes, Sarah R. Supp, Anne Magurran, Maria Dornelas
Science 2020 vol. 368 pp. 1341-1347
Listening and watching Anne-Sophie Crunchant, David Louis Borchers, Hjalmar Kühl, Alex Piel
Methods in Ecology and Evolution 2020 vol. 11 pp. 542-552
Main drivers of mercury levels in Southern Ocean lantern fish Myctophidae José C. Xavier, Paco Bustamante, João P. Coelho, Nicole Ferreira, Sophie Fielding, Miguel A. Pardal, Gabriele Stowasser, Thainara Viana, Geraint A. Tarling, Eduarda Pereira, Andrew Stuart Brierley
Environmental Pollution 2020 vol. 264
Mark recapture distance sampling Shannon Rankin, Cornelia Sabrina Oedekoven, Frederik Archer
Environmental and Ecological Statistics 2020 vol. 27 pp. 233–251
Mercury levels in Southern Ocean squid José C. Xavier, Andrew Stuart Brierley, Paco Bustamante, João P. Coelho, Susan Gregory, Sophie Fielding, Miguel A. Pardal, Bárbara Pereira, Gabriele Stowasser, Geraint A. Tarling, Eduarda Pereira
Chemosphere 2020 vol. 239
Microplastic study reveals the presence of natural and synthetic fibres in the diet of King Penguins (Aptenodytes patagonicus) foraging from South Georgia Camille Melanie Marie-Anne Le Guen, Giuseppe Suaria, Richard B. Sherley, Peter G. Ryan, Stefano Aliani, Lars Boehme, Andrew Stuart Brierley
Environment International 2020 vol. 134
Molecular identification of potential aquaculture pathogens adherent to cnidarian zooplankton Morag Clinton, Christian Delannoy, Andrew Stuart Brierley, David Ellard Keith Ferrier
Aquaculture 2020 vol. 518
Oceanic drivers of sei whale distribution in the North Atlantic Lucy Houghton, Bjarni Mikkelsen, Gísli Víkingsson, Thorvaldur Gunnlaugsson, Nils Øien, Philip Steven Hammond
NAMMCO Scientific Publications 2020 vol. 11
On the use of the Lloyd's Mirror effect to infer the depth of vocalizing fin whales Andreia Pereira, Danielle Harris, Peter Lloyd Tyack, Luis Matias
Journal of the Acoustical Society of America 2020 vol. 148 pp. 3086-3101
Perturbation drives changing metapopulation dynamics in a top marine predator Emma Louise Carroll, Ailsa Jane Hall, Morten Tange Olsen, Aubrie Onoufriou, Oscar Eduardo Gaggiotti, Debbie JF Russell
Proceedings of the Royal Society of London Series B: Biological Sciences 2020 vol. 287
Predicting the exposure of diving grey seals to shipping noise Leah Trigg, Feng Chen, Georgy Shapiro, Simon Ingram, Cecile Vincent, David Thompson, Debbie JF Russell, Matt Carter, Clare Embling
Journal of the Acoustical Society of America 2020 vol. 148 pp. 1014-1029
Reactive stress-coping styles show more variable reproductive expenditure and fitness outcomes Sean Twiss, Courtney Schuert, Naomi Brannan, Amanda Bishop, Patrick Pomeroy
Scientific Reports 2020 vol. 10
Recent increases in assemblage rarity are linked to increasing local immigration Maria Dornelas, Anne Magurran
Royal Society Open Science 2020 vol. 7
Roaring and repetition Aaron M. Thode, Susanna B. Blackwell, Alexander S. Conrad, Katherine H. Kim, Tiago A. Marques, Len Thomas, Cornelia Sabrina Oedekoven, Danielle Harris, Koen Broker
Journal of the Acoustical Society of America 2020 vol. 147 pp. 2061-2080
Robustness of potential biological removal to monitoring, environmental, and management uncertainties André E Punt, Margaret Siple, Tessa B Francis, Philip Steven Hammond, Dennis Heinemann, Kristy J Long, Jeffrey E Moore, Maritza Sepúlveda, Randall R Reeves, Guðjón Már Sigurðsson, Gísli Vikingsson, Paul R Wade, Rob Williams, Alexandre N Zerbini
ICES Journal of Marine Science 2020 vol. Advance Article
Sex-specific variation in the use of vertical habitat by a resident Antarctic top predator Theoni Photopoulou, Karine Heerah, Jennifer Pohle, Lars Boehme
Proceedings of the Royal Society B: Biological Sciences 2020 vol. 287
Site use and connectivity of female grey seals (Halichoerus grypus) around Wales Izzy Langley, Lex Hiby, Thomas Stringell, Ceri Morris, Oliver O'Cahdla, Lisa Morgan, Kate Lock, Sarah Perry, Stephen Westcott, Dave Boyle, Birgitta Beuche, Edward Stubbings, Rebecca Boys, Holly Self, Charles Lindenbaum, Powell Strong, Mick Baines, Patrick Pomeroy
Marine Biology 2020 vol. 167
Stockpiling by pups and self-sacrifice by their fasting mothers observed in birth to weaning serum metabolomes of Atlantic grey seals David Watson, Patrick Pomeroy, Naser F. Al-Tannak, Malcolm Kennedy
Scientific Reports 2020 vol. 10
Successful ecosystem-based management of Antarctic krill should address uncertainties in krill recruitment, behaviour and ecological adaptation Bettina Meyer, Angus Atkinson, Kim S. Bernard, Andrew Stuart Brierley, Ryan Driscoll, Simeon L. Hill, Enrique Marschoff, Dale Maschette, Frances A. Perry, Christian S. Reiss, Emilce Rombolá, Geraint A. Tarling, Sally E. Thorpe, Philip N. Trathan, Guoping Zhu, So Kawaguchi
Communications Earth & Environment 2020 vol. 1
The contribution of rat studies to current knowledge of major depressive disorder Constança Carvalho, Filipa Peste, Tiago A. Marques, Andrew Knight, L. Vicente
Frontiers in Psychology 2020 vol. 11
Uncovering ecological state dynamics with hidden Markov models Brett Thomas McClintock, Roland Langrock, Olivier Gimenez, Emmanuelle Cam, David Louis Borchers, Richard Glennie, Toby A. Patterson
Ecology Letters 2020 vol. Early View
Understanding the stochastic partial differential equation approach to smoothing David Lawrence Miller, Richard Glennie,
Journal of Agricultural, Biological and Environmental Statistics 2020 vol. 25 pp. 1-16
Understanding the stochastic partial differential equation approach to smoothing David Lawrence Miller, Richard Glennie,
ArXiv e-prints 2020
Using continuous-time spatial capture–recapture models to make inference about animal activity patterns Greg B. Distiller, David Louis Borchers, Rebecca J. Foster, Bart J. Harmsen
Ecology and Evolution 2020 vol. Early View
Using density surface models to estimate spatio-temporal changes in population densities and trend Richard Joseph Camp, David Lawrence Miller, Len Thomas, Stephen Terrence Buckland, Steve J. Kendall
Ecography 2020 vol. 43 pp. 1079-1089
dsmextra Phil Bouchet, David Lawrence Miller, Jason Roberts, Laura Mannocci, Catriona M Harris, Len Thomas
Methods in Ecology and Evolution 2020 vol. 11 pp. 1464-1469
A balance of winners and losers in the Anthropocene Maria Dornelas, Nicholas J. Gotelli, Hideyasu Shimadzu, Faye Helen Moyes, Anne Magurran, Brian J. McGill
Ecology Letters 2019 vol. 22 pp. 847-854
A review of unmanned vehicles for the detection and monitoring of marine fauna Ursula K. Verfuss, Ana Sofia Aniceto, Danielle Harris, Douglas Michael Gillespie, Sophie Fielding, Guillermo Jiménez, Phil Johnston, Rachael R. Sinclair, Agnar Sivertsen, Stian A. Solbø, Rune Storvold, Martin Biuw, Roy Wyatt
Marine Pollution Bulletin 2019 vol. 140 pp. 17-29
Accounting for preferential sampling in species distribution models Maria Grazia Pennino, Iosu Paradinas, Janine Baerbel Illian, Facundo Muñoz, José María Bellido, Antonio López-Quílez, David Conesa
Ecology and Evolution 2019 vol. 9 pp. 653-663
Accuracy and precision of dolphin group size estimates Tim Gerrodette, Wayne L. Perryman, Cornelia Sabrina Oedekoven
Marine Mammal Science 2019 vol. 35 pp. 22-39
Advances in research on the impacts of anti-submarine sonar on beaked whales Y. Bernaldo De Quirós, A. Fernandez, R. W. Baird, R. L. Brownell, Natacha Aguilar de Soto, D. Allen, M. Arbelo, M. Arregui, A. Costidis, A. Fahlman, A. Frantzis, F. Gulland, M. Iñíguez, Mark Johnson, A. Komnenou, H. Koopman, D. A. Pabst, W. D. Roe, E. Sierra, M. Tejedor, G. Schorr
Proceedings of the Royal Society B: Biological Sciences 2019 vol. 286
Anthropogenic disturbance in a changing environment Enrico Pirotta, Marc Mangel, Daniel P. Costa, Jeremy Goldbogen, John Harwood, Vincent Hin, Ladd M. Irvine, Bruce R. Mate, Elizabeth A. McHuron, Daniel M. Palacios, Lisa K. Schwarz, Leslie Frances New
Oikos 2019 vol. 128 pp. 1340-1357
Assessing factors associated with changes in the numbers of birds visiting gardens in winter Benjamin Thomas Swallow, Stephen Terrence Buckland, Ruth King, Mike P. Toms
Ecology and Evolution 2019 vol. 9 pp. 12182-12192
Automated peak detection method for behavioral event identification David A. Sweeney, Stacy L. Deruiter, Ye Joo McNamara-Oh, Tiago A. Marques, Patricia Arranz, J. Calambokidis
Animal Biotelemetry 2019 vol. 7
Behavioral responses of individual blue whales (Balaenoptera musculus) to mid-frequency military sonar Brandon Southall, Stacy DeRuiter, Ari Friedlaender, Alison Stimpert, Jeremy Goldbogen, Elliot Hazen, Caroline Casey, Selene Fregosi, Dave Cade, Ann Allen, Catriona M Harris, Greg Schorr, Dave Moretti, Shane Guan, John Calambokidis
Journal of Experimental Biology 2019 vol. 222
Bio-energetic modeling of medium-sized cetaceans shows high sensitivity to disturbance in seasons of low resource supply Vincent Hin, John Harwood, André M. de Roos
Ecological Applications 2019 vol. 29
Careful prior specification avoids incautious inference for log-Gaussian Cox point processes Sigrunn Sørbye, Janine Baerbel Illian, Simpson Daniel, David Burlsem, Håvard Rue
Journal of the Royal Statistical Society: Series C (Applied Statistics) 2019 vol. 68 pp. 543-564
Change in the dominance structure of two marine-fish assemblages over three decades Faye Helen Moyes, Anne Magurran
Journal of Fish Biology 2019 vol. 94 pp. 96-102
Changes in stable isotope compositions during fasting in phocid seals sarah habran, France Damseaux, Patrick Pomeroy, Cathy Debier, Dan Crocker, Gilles Lepoint, Krishna Das
Rapid Communications in Mass Spectrometry 2019 vol. 33 pp. 176-184
Changes in the spatial distribution of acoustically derived Minke whale (Balaenoptera acutorostrata) tracks in response to navy training Catriona M Harris, Stephen Martin, Cameron Martin, Tyler Helble, Elizabeth Henderson, Charles G. M. Paxton, Len Thomas
Aquatic Mammals 2019 vol. 45 pp. 661-674
Changing distribution of the east coast of Scotland bottlenose dolphin population and the challenges of area-based management Monica Arso Civil, Barbara Cheney, Enrico Pirotta, Paul M Thompson, Philip Steven Hammond
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 178-196
Cluster capture-recapture to account for identification uncertainty on aerial surveys of animal populations Ben Stevenson, David Louis Borchers, Rachel M. Fewster
Biometrics 2019 vol. 75 pp. 326-336
Colony-specific differences in decadal longitudinal body composition of a capital-breeding marine top predator Nora Nell Hanson, Sophie Caroline Smout, Simon Moss, Patrick Pomeroy
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 131-143
Comparison of estimated 20-Hz pulse fin whale source levels from the tropical Pacific and Eastern North Atlantic Oceans to other recorded populations Jennifer L. Miksis-Olds, Danielle Harris, Kevin D. Heaney
Journal of the Acoustical Society of America 2019 vol. 146 pp. 2373-2384
Decline in abundance and apparent survival rates of fin whales (Balaenoptera physalus) in the northern Gulf of St. Lawrence Christian Ramp, Julien Delarue, Alain Carpentier, Martine Bérubé, Per J. Palsbøl, Richard Sears, Philip Steven Hammond
Ecology and Evolution 2019 vol. 9 pp. 4231-4244
Decline towards extinction of Mexico's vaquita porpoise (Phocoena sinus) Armando Jaramillo-Legorreta, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Lorenzo Rojas-Branco, Len Thomas, Jay Ver Hoef, Jeffrey Moore, Barbara Taylor, Jay Barlow, NIcholas Tregenza
Royal Society Open Science 2019 vol. 6
Demonstration of the use of environmental DNA for the non-invasive genotyping of a bivalve mollusk, the European flat oyster (Ostrea edulis) Luke Holman, Christopher Michael Hollenbeck, Thomas J. Ashton, Ian Alistair Johnston
Frontiers in Genetics 2019 vol. 10
Density and distribution of western chimpanzees around a bauxite deposit in the Boé Sector, Guinea-Bissau Filipe Dias, José Wenceslau, Tiago A. Marques, David Lawrence Miller
American Journal of Primatology 2019 vol. 81
Did Nineteenth Century marine vertebrate fossil discoveries influence sea serpent reports? Charles G. M. Paxton, Darren Naish
Earth Sciences History 2019 vol. 38 pp. 16-27
Distance sampling Stephen Terrence Buckland, David Lawrence Miller, Eric Rexstad
2019 pp. 97-112
Distance sampling in R David Lawrence Miller, Eric Rexstad, Len Thomas, Jeffrey L. Laake
Journal of Statistical Software 2019 vol. 89
EIRPHOT : A critical assessment of Wales’ grey seal ( Halichoerus grypus ) photo - identification database . Izzy Langley, Tom Stringell, Ceri Morris, Lex Hiby, Patrick Pomeroy
2019
Effect of temporal and spatial resolution on identification of fishing activities in small-scale fisheries using pots and traps Tania Mendo, Sophie Caroline Smout, Tommaso Russo, Lorenzo D'Andrea, Mark Andrew James, Christos Maravelias
ICES Journal of Marine Science 2019 vol. 76 pp. 1601-1609
Effects of impulsive noise on marine mammals Gordon Drummond Hastie, Nathan Merchant, Thomas Goetz, Debbie JF Russell, Paul Thompson, Vincent Janik
Ecological Applications 2019 vol. 29