Publications (PURE)

200 (of 932 /dk/atira/pure/researchoutput/status/published available) for Centre for Research into Ecological & Environmental Modelling (source: University of St Andrews PURE)
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A decision framework to identify populations that are most vulnerable to the population level effects of disturbance John Harwood, Ruth Joy, Catriona M Harris
Conservation Science and Practice 2020 vol. 2
Accounting for detection unveils the intricacy of wild boar and rabbit co-occurrence patterns in a Mediterranean landscape Ana Luísa Barros, Gonçalo Curveira-Santos, Tiago A. Marques, Margarida Santos-Reis
Scientific Reports 2020 vol. 10
An analysis of the risk of collisions between aircraft and vultures in Namibia Morgan Hauptfleisch, Nicki Knox, P Heita, O. Aschenborn, Monique Lea MacKenzie
Namibian Journal of Environment 2020 vol. 4 pp. 41-49
Are in vitro and in silico approaches used appropriately for animal-based major depressive disorder research? Constança Carvalho, Susana A. M. Varela, Tiago A. Marques, Andrew Knight, Luís Vicente
PLoS ONE 2020 vol. 15
Author Correction Miriam Romagosa, Mark Baumgartner, Irma Cascão, Marc O. Lammers, Tiago A. Marques, R.S. Santos,
Scientific Reports 2020 vol. 10
Baleen whale acoustic presence and behaviour at a Mid-Atlantic migratory habitat, the Azores Archipelago Miriam Romagosa, Mark Baumgartner, Irma Cascão, Marc O. Lammers, Tiago A. Marques, Ricardo S. Santos,
Scientific Reports 2020 vol. 10
Coping styles in capital breeders modulate behavioural trade-offs in time allocation courtney schuert, Patrick Pomeroy, sean twiss
Behavioral Ecology and Sociobiology 2020 vol. 74
Correction to David Lawrence Miller, Richard Glennie,
Journal of Agricultural, Biological, and Environmental Statistics 2020
Estimating the effects of pile driving sounds on seals Katherine Fae Whyte, Debbie JF Russell, Carol Elizabeth Sparling, Bas Binnerts, Gordon Drummond Hastie
Journal of the Acoustical Society of America 2020 vol. 147 pp. 3948-3958
Fin whale acoustic presence and song characteristics in seas to the southwest of Portugal Andreia Pereira, Danielle Harris, Peter Lloyd Tyack, Luis Matias
Journal of the Acoustical Society of America 2020 vol. 147 pp. 2235-2249
First abundance estimate for white whales Delphinapterus leucas in Svalbard, Norway J Vacquié-garcia, C Lydersen, Tiago A. Marques, M Andersen, Km Kovacs
Endangered Species Research 2020 vol. 41 pp. 253-263
From pup to predator Matthew Ian Daniel Carter, Brett T McClintock, Clare B Embling, Kimberley A Bennett, David Thompson, Debbie JF Russell
Oikos 2020 vol. 129 pp. 630-642
Habitat partitioning in sympatric delphinids around the Falkland Islands Sophie Caroline Smout, Clinton John Blight, Lars Boehme, Grant Munro, Marina Costa, Sonja Heinrich
Frontiers in Marine Science 2020 vol. 7
Harbour Seal Decline – vital rates and drivers Monica Arso Civil, Izzy Langley, Andy Law, Emily Hague, Eiren Kate Jacobson, Len Thomas, Sophie Caroline Smout, Rebecca Hewitt, Callan David Duck, Chris Morris, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Bernie J McConnell, Ailsa Jane Hall
Landscape-scale forest loss as a catalyst of population and biodiversity change Gergana N. Daskalova, Isla H. Myers-Smith, Anne D. Bjorkman, Shane A. Blowes, Sarah R. Supp, Anne Magurran, Maria Dornelas
Science 2020 vol. 368 pp. 1341-1347
Listening and watching Anne-Sophie Crunchant, David Louis Borchers, Hjalmar Kühl, Alex Piel
Methods in Ecology and Evolution 2020 vol. 11 pp. 542-552
Mark recapture distance sampling Shannon Rankin, Cornelia Sabrina Oedekoven, Frederik Archer
Environmental and Ecological Statistics 2020 vol. 2020
Mercury levels in Southern Ocean squid José C. Xavier, Andrew Stuart Brierley, Paco Bustamante, João P. Coelho, Susan Gregory, Sophie Fielding, Miguel A. Pardal, Bárbara Pereira, Gabriele Stowasser, Geraint A. Tarling, Eduarda Pereira
Chemosphere 2020 vol. 239
Microplastic study reveals the presence of natural and synthetic fibres in the diet of King Penguins (Aptenodytes patagonicus) foraging from South Georgia Camille Melanie Marie-Anne Le Guen, Giuseppe Suaria, Richard B. Sherley, Peter G. Ryan, Stefano Aliani, Lars Boehme, Andrew Stuart Brierley
Environment International 2020 vol. 134
Molecular identification of potential aquaculture pathogens adherent to cnidarian zooplankton Morag Clinton, Christian Delannoy, Andrew Stuart Brierley, David Ellard Keith Ferrier
Aquaculture 2020 vol. 518
Perturbation drives changing metapopulation dynamics in a top marine predator Emma Louise Carroll, Ailsa Jane Hall, Morten Tange Olsen, Aubrie Onoufriou, Oscar Eduardo Gaggiotti, Debbie JF Russell
Proceedings of the Royal Society of London Series B: Biological Sciences 2020 vol. 287
Reactive stress-coping styles show more variable reproductive expenditure and fitness outcomes Sean Twiss, Courtney Schuert, Naomi Brannan, Amanda Bishop, Patrick Pomeroy
Scientific Reports 2020 vol. 10
Recent increases in assemblage rarity are linked to increasing local immigration Maria Dornelas, Anne Magurran
Royal Society Open Science 2020 vol. 7
Roaring and repetition Aaron M. Thode, Susanna B. Blackwell, Alexander S. Conrad, Katherine H. Kim, Tiago A. Marques, Len Thomas, Cornelia Sabrina Oedekoven, Danielle Harris, Koen Broker
Journal of the Acoustical Society of America 2020 vol. 147 pp. 2061-2080
Site use and connectivity of female grey seals (Halichoerus grypus) around Wales Izzy Langley, Lex Hiby, Thomas Stringell, Ceri Morris, Oliver O'Cahdla, Lisa Morgan, Kate Lock, Sarah Perry, Stephen Westcott, Dave Boyle, Birgitta Beuche, Edward Stubbings, Rebecca Boys, Holly Self, Charles Lindenbaum, Powell Strong, Mick Baines, Patrick Pomeroy
Marine Biology 2020 vol. 167
Stockpiling by pups and self-sacrifice by their fasting mothers observed in birth to weaning serum metabolomes of Atlantic grey seals David Watson, Patrick Pomeroy, Naser F. Al-Tannak, Malcolm Kennedy
Scientific Reports 2020 vol. 10
Understanding the stochastic partial differential equation approach to smoothing David Lawrence Miller, Richard Glennie,
Journal of Agricultural, Biological and Environmental Statistics 2020 vol. 25 pp. 1-16
Understanding the stochastic partial differential equation approach to smoothing David Lawrence Miller, Richard Glennie,
ArXiv e-prints 2020
Using density surface models to estimate spatio-temporal changes in population densities and trend Richard Joseph Camp, David Lawrence Miller, Len Thomas, Stephen Terrence Buckland, Steve J. Kendall
Ecography 2020 vol. 43 pp. 1079-1089
A balance of winners and losers in the Anthropocene Maria Dornelas, Nicholas J. Gotelli, Hideyasu Shimadzu, Faye Helen Moyes, Anne Magurran, Brian J. McGill
Ecology Letters 2019 vol. 22 pp. 847-854
A review of unmanned vehicles for the detection and monitoring of marine fauna Ursula K. Verfuss, Ana Sofia Aniceto, Danielle Harris, Douglas Michael Gillespie, Sophie Fielding, Guillermo Jiménez, Phil Johnston, Rachael R. Sinclair, Agnar Sivertsen, Stian A. Solbø, Rune Storvold, Martin Biuw, Roy Wyatt
Marine Pollution Bulletin 2019 vol. 140 pp. 17-29
Accounting for preferential sampling in species distribution models Maria Grazia Pennino, Iosu Paradinas, Janine Baerbel Illian, Facundo Muñoz, José María Bellido, Antonio López-Quílez, David Conesa
Ecology and Evolution 2019 vol. 9 pp. 653-663
Accuracy and precision of dolphin group size estimates Tim Gerrodette, Wayne L. Perryman, Cornelia Sabrina Oedekoven
Marine Mammal Science 2019 vol. 35 pp. 22-39
Advances in research on the impacts of anti-submarine sonar on beaked whales Y. Bernaldo De Quirós, A. Fernandez, R. W. Baird, R. L. Brownell, Natacha Aguilar de Soto, D. Allen, M. Arbelo, M. Arregui, A. Costidis, A. Fahlman, A. Frantzis, F. Gulland, M. Iñíguez, Mark Johnson, A. Komnenou, H. Koopman, D. A. Pabst, W. D. Roe, E. Sierra, M. Tejedor, G. Schorr
Proceedings of the Royal Society B: Biological Sciences 2019 vol. 286
Anthropogenic disturbance in a changing environment Enrico Pirotta, Marc Mangel, Daniel P. Costa, Jeremy Goldbogen, John Harwood, Vincent Hin, Ladd M. Irvine, Bruce R. Mate, Elizabeth A. McHuron, Daniel M. Palacios, Lisa K. Schwarz, Leslie Frances New
Oikos 2019 vol. 128 pp. 1340-1357
Assessing factors associated with changes in the numbers of birds visiting gardens in winter Stephen Terrence Buckland, Ruth King, Mike P. Toms
Ecology and Evolution 2019 vol. 9 pp. 12182-12192
Automated peak detection method for behavioral event identification David A. Sweeney, Stacy L. Deruiter, Ye Joo McNamara-Oh, Tiago A. Marques, Patricia Arranz, J. Calambokidis
Animal Biotelemetry 2019 vol. 7
Behavioral responses of individual blue whales (Balaenoptera musculus) to mid-frequency military sonar Brandon Southall, Stacy DeRuiter, Ari Friedlaender, Alison Stimpert, Jeremy Goldbogen, Elliot Hazen, Caroline Casey, Selene Fregosi, Dave Cade, Ann Allen, Catriona M Harris, Greg Schorr, Dave Moretti, Shane Guan, John Calambokidis
Journal of Experimental Biology 2019 vol. 222
Bio-energetic modeling of medium-sized cetaceans shows high sensitivity to disturbance in seasons of low resource supply Vincent Hin, John Harwood, André M. de Roos
Ecological Applications 2019 vol. 29
Careful prior specification avoids incautious inference for log-Gaussian Cox point processes Sigrunn Sørbye, Janine Baerbel Illian, Simpson Daniel, David Burlsem, Håvard Rue
Journal of the Royal Statistical Society: Series C (Applied Statistics) 2019 vol. 68 pp. 543-564
Change in the dominance structure of two marine-fish assemblages over three decades Faye Helen Moyes, Anne Magurran
Journal of Fish Biology 2019 vol. 94 pp. 96-102
Changes in stable isotope compositions during fasting in phocid seals sarah habran, France Damseaux, Patrick Pomeroy, Cathy Debier, Dan Crocker, Gilles Lepoint, Krishna Das
Rapid Communications in Mass Spectrometry 2019 vol. 33 pp. 176-184
Changes in the spatial distribution of acoustically derived Minke whale (Balaenoptera acutorostrata) tracks in response to navy training Catriona M Harris, Stephen Martin, Cameron Martin, Tyler Helble, Elizabeth Henderson, Charles G. M. Paxton, Len Thomas
Aquatic Mammals 2019 vol. 45 pp. 661-674
Changing distribution of the east coast of Scotland bottlenose dolphin population and the challenges of area-based management Monica Arso Civil, Barbara Cheney, Enrico Pirotta, Paul M Thompson, Philip Steven Hammond
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 178-196
Cluster capture-recapture to account for identification uncertainty on aerial surveys of animal populations Ben Stevenson, David Louis Borchers, Rachel M. Fewster
Biometrics 2019 vol. 75 pp. 326-336
Colony-specific differences in decadal longitudinal body composition of a capital-breeding marine top predator Nora Nell Hanson, Sophie Caroline Smout, Simon Moss, Patrick Pomeroy
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 131-143
Comparison of estimated 20-Hz pulse fin whale source levels from the tropical Pacific and Eastern North Atlantic Oceans to other recorded populations Jennifer L. Miksis-Olds, Danielle Harris, Kevin D. Heaney
Journal of the Acoustical Society of America 2019 vol. 146 pp. 2373-2384
Decline in abundance and apparent survival rates of fin whales (Balaenoptera physalus) in the northern Gulf of St. Lawrence Christian Ramp, Julien Delarue, Alain Carpentier, Martine Bérubé, Per J. Palsbøl, Richard Sears, Philip Steven Hammond
Ecology and Evolution 2019 vol. 9 pp. 4231-4244
Decline towards extinction of Mexico's vaquita porpoise (Phocoena sinus) Armando Jaramillo-Legorreta, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Lorenzo Rojas-Branco, Len Thomas, Jay Ver Hoef, Jeffrey Moore, Barbara Taylor, Jay Barlow, NIcholas Tregenza
Royal Society Open Science 2019 vol. 6
Demonstration of the use of environmental DNA for the non-invasive genotyping of a bivalve mollusk, the European flat oyster (Ostrea edulis) Luke Holman, Christopher Michael Hollenbeck, Thomas J. Ashton, Ian Alistair Johnston
Frontiers in Genetics 2019 vol. 10
Density and distribution of western chimpanzees around a bauxite deposit in the Boé Sector, Guinea-Bissau Filipe Dias, José Wenceslau, Tiago A. Marques, David Lawrence Miller
American Journal of Primatology 2019 vol. 81
Did Nineteenth Century marine vertebrate fossil discoveries influence sea serpent reports? Charles G. M. Paxton, Darren Naish
Earth Sciences History 2019 vol. 38 pp. 16-27
Distance sampling Stephen Terrence Buckland, David Lawrence Miller, Eric Rexstad
2019 pp. 97-112
Distance sampling in R David Lawrence Miller, Eric Rexstad, Len Thomas, Jeffrey L. Laake
Journal of Statistical Software 2019 vol. 89
EIRPHOT : A critical assessment of Wales’ grey seal ( Halichoerus grypus ) photo - identification database . Izzy Langley, Tom Stringell, Ceri Morris, Lex Hiby, Patrick Pomeroy
Effect of temporal and spatial resolution on identification of fishing activities in small-scale fisheries using pots and traps Tania Mendo, Sophie Caroline Smout, Tommaso Russo, Lorenzo D'Andrea, Mark Andrew James, Christos Maravelias
ICES Journal of Marine Science 2019 vol. 76 pp. 1601-1609
Effects of impulsive noise on marine mammals Gordon Drummond Hastie, Nathan Merchant, Thomas Goetz, Debbie JF Russell, Paul Thompson, Vincent Janik
Ecological Applications 2019 vol. 29
Estimating abundance from multiple sampling capture-recapture data via a multi-state multi-period stopover model Hannah Worthington, Rachel McCrea, Ruth King, Richard Griffiths
Annals of Applied Statistics 2019 vol. 13 pp. 2043-2064
Estimating group size from acoustic footprint to improve Blainville’s beaked whale abundance estimation Tiago A. Marques, Patricia Jorge, Helena Mouriño, Len Thomas, Karin Dolan, Charlotte Dunn
Applied Acoustics 2019 vol. 156 pp. 434-439
Estimation of population size when capture probability depends on individual states Hannah Worthington, Rachel McCrea, Ruth King, Richard Griffiths
Journal of Agricultural, Biological and Environmental Statistics 2019 vol. 24 pp. 154-172
Fine-scale habitat partitioning of Chilean and Peale’s dolphins and their overlap with aquaculture Sonja Heinrich, Marjorie Fuentes Riquelme, Philip Steven Hammond
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 212-226
Foraging behavior and disruption in blue, fin, and humpback whales in relation to sonar exposure Catriona M Harris, M Louise Burt, Ann Allen, Paul Wensveen, Patrick Miller, Lise Sivle
Aquatic Mammals 2019 vol. 45 pp. 646-660
From here and now to there and then Phil Bouchet, David Lawrence Miller, Jason Roberts, Laura Mannocci, Catriona M Harris, Len Thomas
From siphonophores to deep scattering layers Roland Hudson Proud, Nils Olav Handegard, Rudy Kloser, Martin Cox, Andrew Stuart Brierley
ICES Journal of Marine Science 2019 vol. 76 pp. 718-733
Gelatinous umbrella: why it is good to be invertebrate Anne Magurran
TLS, The Times Literary Supplement 2019 pp. 32-32
Hierarchical generalized additive models in ecology Eric J. Pedersen, David Lawrence Miller, Gavin L. Simpson, Noam Ross
PeerJ 2019 vol. 7
High oxytocin infants gain more mass with no additional maternal energetic costs in wild grey seals (Halichoerus grypus) Kelly Robinson, Neil Hazon, sean twiss, Patrick Pomeroy
Psychoneuroendocrinology 2019 vol. 110
Identifying fishing grounds from vessel tracks: model-based inference for small scale fisheries Tania Mendo, Sophie Caroline Smout, Theoni Photopoulou, Mark Andrew James
Royal Society Open Science 2019 vol. 6
Influence of feed ration size on somatic and muscle growth in landlocked dwarf and farmed Atlantic salmon Salmo salar Øivind Andersen, Vera Vieira, Jens-Erik Dessen, Ian Alistair Johnston
Journal of Fish Biology 2019 vol. 94 pp. 614-620
Internal lee waves and baroclinic bores over a tropical seamount shark ‘hot-spot’ Phil Hosegood, W.A.M. Nimmo-Smith, Roland Hudson Proud, Kate Adams, Andrew Stuart Brierley
Progress in Oceanography 2019 vol. 172 pp. 34-50
Landscape-scale forest loss as a catalyst of population and biodiversity change Gergana N. Daskalova, Isla H. Myers-Smith, Anne D. Bjorkman, Shane A. Blowes, Sarah R. Supp, Anne Magurran, Maria Dornelas
Model selection with overdispersed distance sampling data Stephen Terrence Buckland, Marie-Lyne Després-Einspenner, Hjalmar S. Kühl
Methods in Ecology and Evolution 2019 vol. 10 pp. 38-47
Modelling reassurances of clinicians with Hidden Markov models Valentin Mina Popov, Alesha Bradley, Gerald Michael Humphris
BMC Medical Research Methodology 2019 vol. 19
Modelling the population size and dynamics of the British grey seal Len Thomas, Debbie JF Russell, Callan David Duck, Chris Morris, Mike Lonergan, David Thompson, John Harwood
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 6-23
Monitoring long-term changes in UK grey seal pup production Debbie JF Russell, Chris Morris, Callan David Duck, David Thompson, Lex Hiby
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 24-39
Open population maximum likelihood spatial capture-recapture Richard Glennie, David Louis Borchers, Matthew Murchie, Bart J. Harmsen, Rebecca J. Foster
Biometrics 2019 vol. 75 pp. 1345-1355
Plotting a future for Amazonian canga vegetation in a campo rupestre context Daniela C Zappi, Marcelo F Moro, Barnaby Walker, Thomas Robert Meagher, Pedro L Viana, Nara F O Mota, Mauricio T C Watanabe, Eimear Nic Lughadha
PLoS ONE 2019 vol. 14
Population-level consequences of seismic surveys on fishes Hans Slabbekoorn, John Dalen, Dick de Haan, Hendrik V. Winter, Craig Radford, Michael A. Ainslie, Kevin D. Heaney, Tobias van Kooten, Len Thomas, John Harwood
Fish and Fisheries 2019 vol. 20 pp. 653-685
Post-disturbance haulout behaviour of harbour seals William David Paterson, Debbie JF Russell, Mick Wu, Bernie J McConnell, John I. Currie, Dominic J. McCafferty, David Thompson
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 144-156
Review of potential line-transect methodologies for estimating abundance of dolphin stocks in the eastern tropical Pacific Cleridy E. Lennert-Cody, Stephen Terrence Buckland, Tim Gerrodette, Andrew Webb, Jay Barlow, Peter T. Fretwell, Mark N. Maunder, Toshihide Kitakado, Jeffrey E. Moore, Michael D. Scott, H.J. Skaug
Journal of Cetacean Research and Management 2019 vol. 19 pp. 9-21
Shining new light on mammalian diving physiology using wearable near-infrared spectroscopy Kimberley Bennett, Mathijs Bronkhorst, Debbie JF Russell, Steven Thomas Balfour, Ryan Milne, Matt Bivins, Simon E. W. Moss, Willy Colier, Ailsa Jane Hall, David Thompson
PLoS Biology 2019 vol. 17
Site fidelity and movement patterns of short-finned pilot whales within the Canary Islands Enrique Pérez-Gil, Mónica Pérez-Gil, Ana Cañadas, Philip Steven Hammond, Vidal Martín
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 227-241
Spatial variability in total and organic mercury levels in Antarctic krill Euphausia superba across the Scotia Sea José Seco, José C. Xavier, João P. Coelho, Bárbara Pereira, Geraint Tarling, Miguel A. Pardal, Paco Bustamante, Gabriele Stowasser, Andrew Stuart Brierley, Maria E. Pereira
Environmental Pollution 2019 vol. 247 pp. 332-339
Spatio-temporal patterns in fin whale (Balaenoptera physalus) habitat use in the northern Gulf of St. Lawrence Christian Ramp, Stéphane Plourde, Caroline Lehoux, Richard Sears, Philip Steven Hammond
Marine Ecology Progress Series 2019 vol. 623 pp. 221-234
Species richness change across spatial scales Jonathan M. Chase, B.J. McGill, Patrick L. Thompson, Laura Ines Henriques Antao, Amanda E. Bates, Shane A. Blowes, Maria Dornelas, Andrew Gonzalez, Anne Magurran, Sarah R. Supp, Marten Winter, Anne D. Bjorkman, Helge Bruelheide, Jarrett E.K. Byrnes, Juliano Sarmento Cabral, Robin Elahi, Catalina Gomez, Hector M. Guzman, Forest Isbell, Isla H. Myers-Smith, Holly P. Jones, Jes Hines, Mark Vellend, Conor Waldock, Mary O'Connor
Oikos 2019 vol. 128 pp. 1079-1091
Spider monkeys, the misunderstood assumptions of distance sampling and the pitfalls of poor field design Antonio Christian de Andrade, Tiago A. Marques, Stephen Terrence Buckland
Biodiversity and Conservation 2019 vol. 28 pp. 4119-4121
The diet of harbour and grey seals around Britain Philip Steven Hammond
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 71-85
The effect of a multi-target protocol on cetacean detection and abundance estimation in aerial surveys C. Lambert, M. Authier, G. Dorémus, A. Gilles, Philip Steven Hammond, S. Laran, A. Ricart, V. Ridoux, M. Scheidat, J. Spitz, O. Van Canneyt
Royal Society Open Science 2019 vol. 6
The geography of biodiversity change in marine and terrestrial assemblages Shane A. Blowes, Sarah R. Supp, Laura Ines Henriques Antao, Amanda Bates, Helge Bruelheide, Jonathan M. Chase, Faye Helen Moyes, Anne Magurran, Brian McGill, Isla H. Myers-Smith, Marten Winter, Anne D. Bjorkman, Diana E. Bowler, Jarrett E. K. Byrnes, Andrew Gonzalez, Jes Hines, Forest Isbell, Holly P. Jones, Laetitia M. Navarro, Patrick L. Thompson, Mark Vellend, Conor Waldock, Maria Dornelas
Science 2019 vol. 366 pp. 339-345
The status of harbour seals (Phoca vitulina) in the UK David Thompson, Callan David Duck, Chris Morris, Debbie JF Russell
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 40-60
Towards a macroscope Maria Dornelas, Elizabeth M. P. Madin, Michael Bunce, Joseph D. DiBattista, Mark Johnson, Joshua S. Madin, Anne Magurran, Brian J. McGill, Nathalie Pettorelli, Oscar Pizarro, Stefan B. Williams, Marten Winter, Amanda E. Bates
Global Ecology and Biogeography 2019 vol. 28 pp. 1937-1948
Trophic ecology of benthic fish assemblages in a lowland river in the Brazilian Amazon Cleber Duarte, Anne Magurran, Jansen Zuanon, Claudia P. Deus
Aquatic Ecology 2019 vol. 53 pp. 707-718
Use of state-space modelling to identify ecological covariates associated with trends in pinniped demography Line Cordes, Paul Thompson, Jason Matthiopoulos, Sophie Caroline Smout
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 101-118
Using dose-response functions to improve calculations of the impact of anthropogenic noise Peter Lloyd Tyack, Len Thomas
Aquatic Conservation: Marine and Freshwater Ecosystems 2019 vol. 29 pp. 242-253
Variations in age- and sex-specific survival rates help explain population trend in a discrete marine mammal population Monica Arso Civil, Barbara Cheney, Valentina Islas-Villanueva, Jefferson Alden Graves, Vincent Janik, Paul M Thompson, Philip Steven Hammond
Ecology and Evolution 2019 vol. 9 pp. 533-544
inlabru Fabian E. Bachl, Finn Lindgren, David Louis Borchers, Janine Baerbel Illian
Methods in Ecology and Evolution 2019 vol. 10 pp. 760-766
β-diversity scaling patterns are consistent across metrics and taxa Laura H. Antão, Brian McGill, Anne Magurran, Amadeu Soares, Maria Dornelas
Ecography 2019 vol. 42 pp. 1012-1023
A collaborative European approach to accelerating translational marine science Philip Brennecke, Maria Ferrante, Ian Alistair Johnston, David Smith
Journal of Marine Science and Engineering 2018 vol. 6
A spatiotemporal multispecies model of a semicontinuous response Janine Baerbel Illian, Mike Toms
Journal of the Royal Statistical Society: Series C (Applied Statistics) 2018 vol. 67 pp. 705-722
AIS data to inform small scale fisheries management and marine spatial planning Mark Andrew James, Tania Mendo, Esther Lane Jones, Kyla Orr, Ali Mcknight, John Benjamin Thompson
Marine Policy 2018 vol. 91 pp. 113-121
Basin-scale distribution of harbour porpoises in the Baltic Sea provides basis for effective conservation actions Ida Carlén, Len Thomas, Julia Carlström, Mats Amundin, Jonas Teilmann, Nick Tregenza, Jakob Tougaard, Jens C. Koblitz, Signe Sveegaard, Daniel Wennerberg, Olli Loisa, Michael Dähne, Katharina Brundiers, Monika Kosecka, Line Anker Kyhn, Cinthia Tiberi Ljungqvist, Iwona Pawliczka, Radomil Koza, Bartlomiej Arciszewski, Anders Galatius, Martin Jabbusch, Jussi Laaksonlaita, Jussi Niemi, Sami Lyytinen, Anja Gallus, Harald Benke, Penina Blankett, Krzysztof E. Skóra, Alejandro Acevedo-Gutiérrez
Biological Conservation 2018 vol. 226 pp. 42-53
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Global Ecology and Biogeography 2018 vol. 27 pp. 760-786
Body density of humpback whales (Megaptera novaengliae) in feeding aggregations estimated from hydrodynamic gliding performance Tomoko Narazaki, Saana Isojunno, Douglas P. Nowacek, Ari S. Friedlaender, Christian Ramp, Sophie Caroline Smout, Kagari Aoki, Volker Bernt Deecke, Katsufumi Sato, Patrick Miller
PLoS ONE 2018 vol. 13
Cetacean rapid assessment: an approach to fill knowledge gaps and target conservation across large data deficient areas Gillian Tracey Braulik, Magreth Kasuga, Anja Wittich, Jeremy J Kiszka, Jamie Donald John MacAulay, Douglas Michael Gillespie, Jonathan Charles David Gordon, Said Shaib Said, Philip Steven Hammond
Aquatic Conservation: Marine and Freshwater Ecosystems 2018 vol. 28 pp. 216-230
Comparing methods suitable for monitoring marine mammals in low visibility conditions during seismic surveys Ursula K. Verfuss, Douglas Michael Gillespie, Jonathan Charles David Gordon, Tiago A. Marques, Brianne Miller, Rachael Plunkett, James A. Theriault, Dominic John Tollit, Daniel P. Zitterbart, Philippe Hubert, Len Thomas
Marine Pollution Bulletin 2018 vol. 126 pp. 1-18
Corrigendum: Jon Aars, Tiago A. Marques, Karen Lone, Magnus Andersen, Øystein Wiig, Ida Marie Bardalen Fløystad, Snorre B. Hagen, Stephen Terrence Buckland
Polar Research 2018 vol. 37
Density estimation of sound-producing terrestrial animals using single automatic acoustic recorders and distance sampling Esther Sebastián-González, Richard Joseph Camp, Ann M. Tanimoto, Priscilla M. de Oliveira, Bruna B. Lima, Tiago A. Marques, Patrick J. Hart
Avian Conservation and Ecology 2018 vol. 13
Divergent biodiversity change within ecosystems Anne Magurran, Amy Elizabeth Deacon, Faye Helen Moyes, Hideyasu Shimadzu, Maria Dornelas, Dawn Phillip, Indar Ramnarine
Proceedings of the National Academy of Sciences of the United States of America 2018 vol. 115 pp. 1843-1847
Diving behavior of Cuvier's beaked whales inferred from three-dimensional acoustic localization and tracking using a nested array of drifting hydrophone recorders Jay Barlow, Emily T. Griffiths, Holger Klinck, Danielle Harris
Journal of the Acoustical Society of America 2018 vol. 144 pp. 2030-2041
Estimating effective detection area of static passive acoustic data loggers from playback experiments with cetacean vocalisations Hanna K. Nuuttila, Katharina Brundiers, Michael Dähne, Jens C. Koblitz, Len Thomas, Winnie Courtene-Jones, Peter G. H. Evans, John R. Turner, Jim D. Bennell, Jan G. Hiddink
Methods in Ecology and Evolution 2018 vol. 9 pp. 2362-2371
Fin whale density and distribution estimation using acoustic bearings derived from sparse arrays Danielle Harris, Jennifer L. Miksis-Olds, Julia A. Vernon, Len Thomas
Journal of the Acoustical Society of America 2018 vol. 143 pp. 2980-2993
Fine-scale depth structure of pelagic communities throughout the global ocean based on acoustic sound scattering layers Roland Hudson Proud, Martin Cox, Camille Melanie Marie-Anne Le Guen, Andrew Stuart Brierley
Marine Ecology Progress Series 2018 vol. 598 pp. 35-48
Genomic tools and selective breeding in molluscs Christopher Michael Hollenbeck, Ian Alistair Johnston
Frontiers in Genetics 2018 vol. 9
Gradients in predation risk in a tropical river system Amy Elizabeth Deacon, Anne Magurran
Current Zoology 2018 vol. 64 pp. 213-221
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Harbour seals avoid tidal turbine noise Gordon Drummond Hastie, Debbie JF Russell, Paul Lepper, Jim Elliott, Ben Wilson, Steven Benjamins, David Thompson
Journal of Applied Ecology 2018 vol. 55 pp. 684-693
Heterospecific shoaling in an invasive poeciliid: shared history does not affect shoal cohesion Jarome R. Ali, Amy Elizabeth Deacon, Keshan Mahabir, Indar W. Ramnarine, Anne Magurran
Animal Behaviour 2018 vol. 138 pp. 1-8
How pre- and postcopulatory sexual selection influence male mating decisions in a promiscuous species Ines Orfao, Alfredo Fernandez Ojanguren, Miguel Maria Borges Da Costa Guint Barbosa, Luis Vicente, Susana Varela, Anne Magurran
Animal Behaviour 2018 vol. 136 pp. 147-157
Individual variation in reproductive behaviour is linked to temporal heterogeneity in predation risk Miguel Maria Borges Da Costa Guint Barbosa, Amy Elizabeth Deacon, Indar Ramnarine, Michael Blair Morrissey, Anne Magurran
Proceedings of the Royal Society B: Biological Sciences 2018 vol. 285
Level set Cox processes Anders Hildeman, David Bolin, Jonas Wallin, Janine Baerbel Illian
Spatial Statistics 2018 vol. 28 pp. 169-193
Loggerhead turtle Caretta caretta density and abundance in Chesapeake Bay and the temperate ocean waters of the southern portion of the Mid-Atlantic Bight Susan G. Barco, M Louise Burt, Robert A. DiGiovanni, W. Mark Swingle, Amanda S. Williard
Endangered Species Research 2018 vol. 37 pp. 269-287
Man-made structures and Apex Predators: Spatial interactions and overlap (MAPS) James Grecian, Elizabeth A Masden, Philip Steven Hammond, Ellie Owen, Francis Daunt, Sarah Wanless, Debbie JF Russell
Marine mammals and sonar Catriona M Harris, Len Thomas, Erin Falcone, John Hildebrand, Dorian Houser, Petter Kvadsheim, Frans-Peter A. Lam, Patrick Miller, David J. Moretti, Andrew Read, Hans Slabbekoorn, Brandon L. Southall, Peter Lloyd Tyack, Douglas Wartzok, Vincent Janik
Journal of Applied Ecology 2018 vol. 55 pp. 396-404
Modelling the broadband propagation of marine mammal echolocation clicks for click-based population density estimates Alexander von Benda-Beckmann, Len Thomas, Peter Lloyd Tyack, Michael Ainslie
Journal of the Acoustical Society of America 2018 vol. 143 pp. 954-967
More than the sum of the parts Anne Magurran, P. A. Henderson
Proceedings of the Royal Society B: Biological Sciences 2018 vol. 285
Multi-decadal and ontogenetic trophic shifts inferred from stable isotope ratios of pinniped teeth Nora Nell Hanson, Esther Lane Jones, Rob Harris
Oikos 2018 vol. 127 pp. 134-146
Phylogenetic relationships in southern African Bryde's whales inferred from mitochondrial DNA Philip Steven Hammond, Vic G Cockcroft, Peter B Best, Meredith Thornton, Jefferson Alden Graves
Conservation Genetics 2018 vol. 19 pp. 1349-1365
Primary education in Vietnam and pupil online engagement Quynh Nguyen, Raouf Naguib, Ashish Das, Michail Papathomas, Edgar Vallar, Nilmini Wickramasinghe, Gil Nonato Santos, Maria Cecilia Galvez, Viet Nguyen
International Journal of Educational Management 2018 vol. 32 pp. 71-83
Review and evaluation of low visibility real-time monitoring techniques U. K. Verfuss, Douglas Michael Gillespie, J. Gordon, Tiago A. Marques, B. Miller, J. Theriault
Seal carrion is a predictable resource for coastal ecosystems Maria-Martina Quaggiotto, Philip S. Barton, Chris Morris, Simon E. W. Moss, Patrick Pomeroy, Dominic J. McCafferty,
Acta Oecologica 2018 vol. 88 pp. 41-51
Simulating shifts in taxonomic and functional β-diversity of ray-finned fishes Anderson Aires Eduardo, Faye Helen Moyes, Pablo Ariel Martinez, Anne Magurran, Sidney F. Gouveia
Perspectives in Ecology and Conservation 2018 vol. 16 pp. 186-192
Sociability between invasive guppies and native topminnows Alfredo Fernandez Ojanguren, Omar Domínguez-Domínguez, Anne Magurran
PLoS One 2018 vol. 13
Spline-based nonparametric inference in general state-switching models Roland Langrock, Timo Adam, Vianey Leos-Barajas, Sina Mews, David Lawrence Miller, Yannis Papastamatiou
Statistica Neerlandica 2018 vol. 72 pp. 179-200
The challenge of habitat modelling for threatened low density species using heterogeneous data Ana Maria Canadas, Natacha Aguilar de Soto, M. Aissi, A. Arcangeli, M. Azzolin, A. B-Nagy, G Bearzi, I. Campana, C. Chicote, Cedric Cotte, R. Crosti, L David, A. Di Natale, A. Frantzis, P. Garcia, M. Gazo, R. Gutierrez-Xarxa, D. Holcer, S. Laran, G. Lauriano, T Lewis, A. Moulins, B. Mussi, G. Notarbartolo di Sciara, Simone Panigada, X. Pastor, E. Politi, M. Pulcini, J.A. Raga, Luke Edward Rendell, M. Rosso, P. Tepsich, J. Tomás, M. Tringali, Th. Roger
Ecological Indicators 2018 vol. 85 pp. 128-136
Turbulent flow reduces oxygen consumption in the labriform swimming shiner perch, Cymatogaster aggregata Julie M. van der Hoop, Margaret L. Byron, Karlina Ozolina, David Lawrence Miller, Jacob L. Johansen, Paolo Domenici, John F. Steffensen
Journal of Experimental Biology 2018 vol. 221
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Journal of the Acoustical Society of America 2018 vol. 144 pp. 3618-3626
Use of micronekton data and models to improve ecology of top predators Roland Hudson Proud, Andrew Stuart Brierley
Validating Synthetic Longitudinal Populations for evaluation of Population Data Linkage Tom Dalton, Graham Njal Cameron Kirby, Alan Dearle, Ozgur Akgun, Monique Lea MacKenzie
Weather-driven change in primary productivity explains variation in the amplitude of two herbivore population cycles in a boreal system Joshua H. Schmidt, Eric Rexstad, Carl A. Roland, Carol L. McIntyre, Margaret C. MacCluskie, Melanie J. Flamme
Oecologia 2018 vol. 186 pp. 435-446
A new approach to estimate fecundity rate from inter-birth intervals Monica Arso Civil, Barbara Cheney, Paul Thompson, Philip Steven Hammond
Ecosphere 2017 vol. 8
A simulation approach to assessing environmental risk of sound exposure to marine mammals Carl Robert Donovan, Catriona M Harris, Lorenzo Milazzo, John Harwood, Laura Helen Marshall,
Ecology and Evolution 2017 vol. 7 pp. 2101-2111
A workflow used to design low density SNP panels for parentage assignment and traceability in aquaculture species and its validation in Atlantic salmon Daniel Garcia de la Serrana Castillo, Aubrie Onoufriou, Borghild Hillestad, Ian Alistair Johnston
Aquaculture 2017 vol. 476 pp. 59-64
Addressing uncertainty in marine resource management; combining community engagement and tracking technology to characterize human behavior Kristian Metcalfe, Tim Collins, Kirsten E. Abernethy, Richard Boumba, Jean-Claude Dengui, Ricky Miyalou, Richard J. Parnell, Kate E. Plummer, Debbie JF Russell, Gilbert Koumba Safou, Dominic Tilley, Rachel A. Turner, Hilde Vanleeuwe, Matthew J. Witt, Brendan J. Godley
Conservation Letters 2017 vol. 10 pp. 459-468
An analysis of pilot whale vocalization activity using hidden Markov models Valentin Mina Popov, Roland Langrock, Stacy Lynn De Ruiter, Fleur Visser
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An endangered tree fern increases beta-diversity at a fine scale in the Atlantic Forest Ecosystem Raquel Negrão Baldoni, Talita Sampaio-e-Silva, Anne Magurran, Dalva Silva Matos
Flora 2017 vol. 234 pp. 1-6
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Environmental Sciences Europe 2017 vol. 29
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Endangered Species Research 2017 vol. 34 pp. 149-165
Approaches to Understanding the Cumulative Effects of Stressors on Marine Mammals Peter Lloyd Tyack, Helen Bailey, Daniel Crocker, James E Estes, Clinton D Francis, John Harwood, Lori Schwacke, Len Thomas, Douglas Wartzok
Assigning stranded bottlenose dolphins to source stocks using stable isotope ratios following the Deepwater Horizon oil spill A A Hohn, Len Thomas, R. H. Carmichael, J. Litz, C. Clemons-Chevis, S. F. Shippee, C. Sinclair, S. Smith, T. R. Speakman, M. C. Tumlin, E. S. Zolman
Endangered Species Research 2017 vol. 33 pp. 235-252
Attributing changes in the distribution of species abundance to weather variables using the example of British breeding birds Cornelia Sabrina Oedekoven, David Andrew Elston, Phil Harrison, Mark Brewer, Stephen Terrence Buckland, Alison Johnston, Simon Foster, James Pearce-Higgins
Methods in Ecology and Evolution 2017 vol. 8 pp. 1690-1702
Bayesian computing with INLA Haavard Rue, Andrea Riebler, Sigrunn H. Sørbye, Janine Baerbel Illian, Daniel P. Simpson, Finn K. Lindgren
Annual Review of Statistics and its Application 2017 vol. 4 pp. 395-421
Best practices for virtual participation in meetings Stephanie E. Hampton, Benjamin S. Halpern, Marten Winter, Jennifer K. Balch, John N. Parker, Jill S. Baron, Margaret Palmer, Mark P. Schildhauer, Pamela Bishop, Thomas Robert Meagher, Alison Specht
The Bulletin of the Ecological Society of America 2017 vol. 98 pp. 57-63
Biogeography of the global ocean's mesopelagic zone Roland Hudson Proud, Martin James Cox, Andrew Stuart Brierley
Current Biology 2017 vol. 27 pp. 113-119
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Journal of Agricultural, Biological, and Environmental Statistics 2017 vol. 22 pp. 221-223
Can the camera lie? A non-permanent nick in a bottlenose dolphin (Tursiops truncatus) Barbara Cheney, Paul M Thompson, Philip Steven Hammond
Aquatic Mammals 2017 vol. 43 pp. 156-161
Community-level regulation of temporal trends in biodiversity Nicholas Gotelli, Hideyasu Shimadzu, Maria Dornelas, Brian McGill, Faye Helen Moyes, Anne Magurran
Science Advances 2017 vol. 3
Counting chirps G. John Measey, Ben Stevenson, tanya scott, Res Altwegg, David Louis Borchers
Journal of Applied Ecology 2017 vol. 54 pp. 894-902
Determining the behavioural dose-response relationship of marine mammals to air gun noise and source proximity Rebecca A. Dunlop, Michael J. Noad, Robert D. McCauley, Lindesay Alexandra Sarah Scott-Hayward, Eric Kniest, Robert Slade, David Paton, Douglas H. Cato
Journal of Experimental Biology 2017 vol. 220 pp. 2878-2886
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Marine Mammal Science 2017 vol. 33 pp. 59-79
Distance sampling detection functions David Louis Borchers, Martin James Cox
Biometrics 2017 vol. 73 pp. 593-602
Distance sampling with camera traps Stephen Terrence Buckland, Marie-Lyne Despres-Einspenner, Hjalmar Kuhn
Methods in Ecology and Evolution 2017 vol. 8 pp. 1558-1565
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Deep Sea Research Part II: Topical Studies in Oceanography 2017 vol. 141 pp. 8-19
Divergent regulation of insulin-like growth factor binding protein genes in cultured Atlantic salmon myotubes under different models of catabolism and anabolism Daniel Garcia de la Serrana Castillo, Eduardo Nicolas Jofre, Samuel A. M. Martin, Ian Alistair Johnston, Daniel J. Macqueen
General and Comparative Endocrinology 2017 vol. 247 pp. 53-65
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Canadian Journal of Fisheries and Aquatic Sciences 2017 vol. 74 pp. 716-726
Estimates of local biodiversity change over time stand up to scrutiny Mark Vellend, Maria Dornelas, Lander Baeten, Robin Beauséjour, Carissa D. Brown, Pieter De Frenne, Sarah C. Elmendorf, Nicholas J Gotelli, Faye Helen Moyes, Isla H. Myers-Smith, Anne Magurran, Brian J. McGill, Hideyasu Shimadzu,
Ecology 2017 vol. 98 pp. 583-590
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Deep Sea Research Part II: Topical Studies in Oceanography 2017 vol. 141 pp. 41-58
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Environmental and Ecological Statistics 2017 vol. 24 pp. 399-414
Evaluating detectability of freshwater fish assemblages in tropical streams Amy Elizabeth Deacon, Rajindra Mahabir, Devan Inderlall, Indar W. Ramnarine, Anne Magurran
Environmental Biology of Fishes 2017 vol. 100 pp. 839-849
Explaining the lethality of boko haram’s terrorist attacks in nigeria, 2009–2014 Andre Python, Janine Baerbel Illian, Marta Blangiardo
2017 vol. 194 pp. 231-239
Extinction is imminent for Mexico’s endemic porpoise unless fishery bycatch is eliminated Barbara L Taylor, Lorenzo Rojas-Bracho, Jeffrey Moore, Armando Jaramillo-Legorreta, Jay M Ver Hoef, Gustavo Cardenas-Hinojosa, Edwyna Nieto-Garcia, Jay Barlow, Tim Gerrodette, Nicholas Tregenza, Len Thomas, Philip Steven Hammond
Conservation Letters 2017 vol. 10 pp. 588-595
Extinction risk and threats to plants Eimear Nic Lughadha, Catia Canteiro, Steven Bachman, David Baines, Lauren Gardiner, Thomas Robert Meagher, Malin Rivers, Andre Shuiteman, Emma Williams, Serene Hargreaves
2017 pp. 72-77
Extrapolating cetacean densities to quantitatively assess human impacts on populations in the high seas Laura Mannocci, Jason J Roberts, David Lawrence Miller, Patrick N Halpin
Conservation Biology 2017 vol. 31 pp. 601-614
FIS013 – Scoping the background information for an ecosystem approach to fisheries in Scottish waters Michael R. Heath, Law Richard, Searle Kate, Robin Cook, Dougie Speirs, Francis Daunt, Sarah Wanless, Kieran Hyder, John K. Pinnegar, Robert Thorpe, Diele Karen, Neil Campbell, Peter Wright, James Thorburn, Robert Arthur, Paul Macdonald, Beth Mouat, Clive Fox, Sheila Heymans, Ken Coull, Peter Evans, Paul Fernandes, Philip Steven Hammond, Sophie Caroline Smout, Jeppe Kolding, David Reid
Fine-scale harbour seal usage for informed marine spatial planning Esther Lane Jones, Carol Elizabeth Sparling, Bernie J McConnell, Chris Morris, Sophie Caroline Smout
Scientific Reports 2017 vol. 7
From distance sampling to spatial capture-recapture David Louis Borchers, Tiago A. Marques
Advances in Statistical Analysis 2017 vol. 101 pp. 475-494
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Geophysical Research Letters 2017 vol. 44 pp. 3841-3848
Guest editors’ introduction to the special issue on “Ecological Statistics” Roland Langrock, David Louis Borchers
AStA Advances in Statistical Analysis 2017 vol. 101 pp. 345-347
Harbour Seal Decline – vital rates and drivers. Monica Arso Civil, Sophie Caroline Smout, David Thompson, Andrew Brownlow, Nicolas Davison, Mariel Doeschate, Callan David Duck, Chris Morris, Caroline Cummings, Bernie J McConnell, Ailsa Jane Hall
Impact of wild prey availability on livestock predation by snow leopards Kulbhushansingh R. Suryawanshi, Stephen M. Redpath, Yash Veer Bhatnagar, Uma Ramakrishnan, Vaibhav Chaturvedi, Sophie Caroline Smout, Charudutt Mishra
Royal Society Open Science 2017 vol. 4
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Advances in Statistical Analysis 2017 vol. 101 pp. 495-520
Individual size, sex and rearing environment impact on aggression in newly weaned seals Kelly Robinson, Patrick Pomeroy, Neil Hazon, Simon Moss, Sean Twiss
Marine Mammal Science 2017 vol. 33 pp. 621-629
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Ecosphere 2017 vol. 8
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Last call: Passive acoustic monitoring shows continued rapid decline of critically endangered vaquita Len Thomas, Armando Jaramillo-legorreta, Gustavo Cardenas-hinojosa, Edwyna Nieto-garcia, Lorenzo Rojas-bracho, Jay M. Ver Hoef, Jeffrey Moore, Barbara Taylor, Jay Barlow, Nicholas Tregenza
Journal of the Acoustical Society of America 2017 vol. 142 pp. EL512-EL517
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2017 vol. 27
Low tortoise abundances in pine forest plantations in forest-shrubland transition areas Roberto C. Rodríguez-Caro, Cornelia Sabrina Oedekoven, Eva Graciá, José D. Anadón, Stephen Terrence Buckland, Miguel A. Esteve-Selma, Julia Martinez, Andrés Giménez
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